RetrogeneDB ID:
retro_mputfur_1433
Organism:
Location:
GL897134.1:1865562-1865875 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
73.64 %
Coverage:
82.17 %
Frameshifts:
4
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1433
CTGAGACCCCTGGAAAAGCTTGTGGGGAAGGGGGCAAGAAAAGAAGCAAGTTCTGAAGTT
TACCCTGTGACTGCACTCAGCCTGTAGAAGATGGAATCATGGATGCTGCCCCTTTTGAGC
AGTTTATTCAAGAGAGATTCAAAGTGAATAGAAAAGCTGGGAATCTTGGGGGAGGGGTTG
TAACCATGGAAGGGAACAAGAGCAAGATTATTTTACCTTTTGAGGTGTCTTTTTCCAGCA
GACTTTTGAAATATTTCCTGAAAAATATTTGAAAAATAATCTACGTGATTGGTTGTATCT
AGTTGCTAACAGC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPVKKLVAKG-GKK-KKQVLKFTL-DCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTK-KYLKKNNL
..P..KLV.KG.GKK.KKQVLKFTL.DCT.PVEDGIMDAA.FEQF.QER.KVN.KAGNLGGGVVT.E..KSKI....EV.FS.R.LKY..K.KYL.KNNL
Retrocopy
LRPLEKLVGKG/GKK/KKQVLKFTL\DCTQPVEDGIMDAAPFEQFIQERFKVNRKAGNLGGGVVTMEGNKSKIILPFEVSFSSRLLKYFLK/KYL-KNNL


Parental protein
RDWLRVVANS
RDWL..VANS
Retrocopy
RDWLYLVANS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide