RetrogeneDB ID:
retro_mputfur_1441
Organism:
Location:
GL897136.1:708826-709066 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
53.66 %
Coverage:
98.77 %
Frameshifts:
2
Stop codons:
3


Parental gene:
Parental gene symbol:
ATP6V0E2
Parental gene aliases:
No gene alias available
Parental gene description:
ATPase, H+ transporting V0 subunit e2 [Source:HGNC Symbol;Acc:21723]

Genomic region (view in browser)





>retro_mputfur_1441
ATAGCATGTAACAGCCTCACAGTGCCTCTCATCTTGGTAAGTGTGTGCTGGGGCTTCCTC
AGCTTCTGCATGCCCTGGTTTACCCATAAGGGTCCCAACTGAGGAGTTATTATCACCATG
ATGGTAACCTGTTCAGTTTGCTGCTATCTCTTTTGCTGATTGCAGTTCCGGCCCAACTTA
ACCCTCTCTTTGGACCATAGTTGACAAAATGAAACTATCTGATACCTCAGGTATCGTTGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MTAHSFALPVIIFTTFWGLIGIAGPWFVPKGPNRGVIITMLVATAVCCYLF-WLITILAQLNPLFGPQL-KNETIWYVRFLW
....S...P.I.....WG......PWF..KGPN.GVIITM.V...VCCYLF..LI...AQLNPLFGP.L..NETI.Y.R..W
Retrocopy
IACNSLTVPLILVSVCWGFLSFCMPWFTHKGPN*GVIITMMVTCSVCCYLF/LLIAVPAQLNPLFGP*L\QNETI*YLRYRW


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide