RetrogeneDB ID:
retro_mputfur_145
Organism:
Location:
GL896938.1:2651855-2652863 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
79.29 %
Coverage:
99.71 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_145
ATGGCTCAGTACAAGGGCACGATGCGCGAGGCCGGCCGGGCCATGCACCTGATCAAGAAG
CGGGAAAAGCAGAAGGAGCAGATGGAGGTGCTGAAGCAGCGGATCGCCGAGGAGACCATC
ATCAAGTCGAAGGTGGACAAGAAATTCTCGGCTCATTACGACGCCGTGGAGGCCGAGCTC
AAGTCGAGCACGGTGGGCCTGGTGACCCTGAACGACATGAAGGCCAAGCAGGAGGCCCTG
CTGAAGGAGCGGGAGATGCAGCTGGCCAAGAGGGAGCAGCTGGAGGCGCGGCGGCTGCAG
CTGGAGGCGCTGCGGGAGAAGGAGCGCAAGCAGGAGCAGAAGCGCAAGGTCTGCAGCCTG
TCCTTCACGCCGGACGAGGGCGACGAGGGCGACGAGGACGCGACGGCTGGGGAGCAGCCC
GGGTCCGCGGCGGGGAGCAAGCGGCGGAAGAACCTGGGGAAGAATCCCGACGTGGACACG
AGCTTCCTGCCGGACCGCGACCGCGAGGAGGAGGAGAACCGGCTGCGCGAGCAGCTGCGG
CAGGAGTGGGAGGCGCGGCGCGAGAAGGTGAAGCGCGAGGAGATGGAGGTCACGTTCAGC
TACTGGGACGGCTCGGGGCACCGGCGCACGGTGCGGATCCACAAGGGCGGCACGGTGCAG
CAGTTCCTGAAGAAGGCGCTGCAGGGGCTGCGCAAGGACTTCCGCGAGCTGCGCTCGGCC
GGCGTGGAGCAGCTCATGTACATCAAGGAGGACCTGATCCTGCCCCACTACCACACCTTC
TACGACTTCATCGTCACCAAGGCCCGGGGCAAGAGCGGGCCGCTCTTCAGCTTCGACGTG
CACGACGACGTGCGGCTGCTGAGCGACGCCACCATGGAGAAGGACGAGTCGCACGCGGGC
AAGGTGGTGCTGCGCAGCTGGTACGAGAAGAACAAGCACATCTTCCCTGCCAGCCGCTGG
GAGCCCTACGACCCCGAGAAGAAGTGGGACAAGTACACGATCCGATGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAQYKGAASEAGRAMHLMKKREKQREQMEQMKQRIAEENIMKSNIDKKFSAHYDAVEAELKSSTVGLVTLNDMKAKQEALVKEREKQLAKKEQSKELQLK
MAQYKG...EAGRAMHL.KKREKQ.EQME..KQRIAEE.I.KS..DKKFSAHYDAVEAELKSSTVGLVTLNDMKAKQEAL.KERE.QLAK.EQ.....L.
Retrocopy
MAQYKGTMREAGRAMHLIKKREKQKEQMEVLKQRIAEETIIKSKVDKKFSAHYDAVEAELKSSTVGLVTLNDMKAKQEALLKEREMQLAKREQLEARRLQ


Parental protein
LEKLREKERKQEAKRKISSLSFTLDEEEEAGDEEEEAAAYEEELEREEVTTKKRKLGKNPDVDTSFLPDRDREEEENRLREELRQEWEAKQEKIKSEEIE
LE.LREKERKQE.KRK..SLSFT.DE....GDE..E.A...E.............LGKNPDVDTSFLPDRDREEEENRLRE.LRQEWEA..EK.K.EE.E
Retrocopy
LEALREKERKQEQKRKVCSLSFTPDE----GDEGDEDATAGEQPGSAAGSKRRKNLGKNPDVDTSFLPDRDREEEENRLREQLRQEWEARREKVKREEME


Parental protein
ITFSYWDGSGHRRTVKMKKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEKDE
.TFSYWDGSGHRRTV...KG.T.QQFL.KAL..LRKDF.ELRSAGVEQLMYIKEDLI.PH.H.FYDFIVTKARGKSGPLF.FDVHDDVRLLSDAT.EKDE
Retrocopy
VTFSYWDGSGHRRTVRIHKGGTVQQFLKKALQGLRKDFRELRSAGVEQLMYIKEDLILPHYHTFYDFIVTKARGKSGPLFSFDVHDDVRLLSDATMEKDE


Parental protein
SHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDKYTV
SHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDKYT.
Retrocopy
SHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDKYTI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide