RetrogeneDB ID:
retro_mputfur_146
Organism:
Location:
GL896905.1:16476080-16477064 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.86 %
Coverage:
99.7 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_146
ATGAGTTTTCTTGGAGGCTTTTTTGGACCCATTTGTGAGATTGATGTTGTCCTTAATGAT
GGGGAGACCAGGAAAATGGCTGAAATGAAAACTGAAGATGGCAAAGTAGAAAAACACTAT
CTTTTCTATGACGGAGAATCCGTTTCAGGAAAGGTAAACCTAGCCTTTAAGCAACCTGGA
AAGAGGCTAGAGCACCAAGGAATTAGAATTGAATTTGTAGGTCAAATTGAACTTTTCAAT
GACAAGAGTAATACTCATGAATTTGTAAACCTAGTGAAAGAACTAGCTTTGCCTGGAGAA
TTGATTCAGAGCAGAAGTTATGATTTTGAATTTATGCAAGTTGAAAAGCCATATGAATCT
TACATCGGTGCCAATGTTCGCTTGAGGTATTTTCTTAAAGTGACAATAGTAAGAAGACTG
ACAGACTTGATAAAAGAATATGATCTTATTGTTCACCAGCTTGCCACATATCCTGATGTT
AACAACTCAATTAAGATGGAAGTAGGCATTGAAGATTGTCTACACATAGAATTTGAATAT
AATAAATCAAAGTATCATCTAAAGGATGTGATTGTTGGAAAAATTTACTTTTTATTAGTA
AGAATAAAAATCCAACATATGGAGTTGCAACTGATCAAAAAAGAGATCACAGGAATTGGA
CCCAGTACCACCACAGAAACAGAAACAATTGCTAAATATGAAATAATGGATGGCGCACCA
GTAAAAGGTGAATCAATCCCAATAAGACTATTTTTAGCAGGATATGATCCAACCCCTACA
ATGCGAGATGTGAACAAAAAATTTTCAGTAAGGTACTTTTTGAATCTAGTCCTTGTTGAT
GAGGAAGACAGAAGGTACTTCAAGCAGCAGGAGATCATTTTATGGAGAAAAGCTCCTGAA
AAATTGAGGAAACAGAGAACAAACTTTCACCAGCGATTTGAATCACCAGAGTCACAGGCA
TCTGCTGAACAGCCCGAAATGTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SFLGGFFGPICEIDVVLNDGETRKMAEMKTEDGKVEKHYLFYDGESVSGKVNLAFKQPGKRLEHQGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGEL
SFLGGFFGPICEIDVVLNDGETRKMAEMKTEDGKVEKHYLFYDGESVSGKVNLAFKQPGKRLEHQGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGEL
Retrocopy
SFLGGFFGPICEIDVVLNDGETRKMAEMKTEDGKVEKHYLFYDGESVSGKVNLAFKQPGKRLEHQGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGEL


Parental protein
TQSRSYDFEFMQVEKPYESYIGANVRLRRYFLKVTIVRRLTDLIKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLV
.QSRSYDFEFMQVEKPYESYIGANVRL.RYFLKVTIVRRLTDLIKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLV
Retrocopy
IQSRSYDFEFMQVEKPYESYIGANVRL-RYFLKVTIVRRLTDLIKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLV


Parental protein
RIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAPE
RIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAPE
Retrocopy
RIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAPE


Parental protein
KLRKQRTNFHQRFESPESQAFCVQIEI
KLRKQRTNFHQRFESPESQA...Q.E.
Retrocopy
KLRKQRTNFHQRFESPESQASAEQPEM


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide