RetrogeneDB ID:
retro_mputfur_1461
Organism:
Location:
GL897145.1:2190789-2191291 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
78.24 %
Coverage:
50.45 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1461
ATAAATGGATTTGGCTTTACTGGGCACCTGGTCACCAGAGCTGCTTTTAACTCTGGCAAA
GCAAATACTGTCACCATCAATGACCCTTCATTCACCTCAACCACATGGTCTACATGTTCC
AGTATGATTCTACCCACAGCAAAGTCAATGGTACCATCAAGGATGAGAACAGGAAACTTG
TCATCCATGGAAAACCTATCTCCATCTTCCAGGAGTGATACCCTGTCACCATCAAATGGG
GTGATGCTAGTGCTGAGTATGTTGTGAGTCCACTGGGGTCTTCACCACCATGGGGAAGGC
TGGAGCTCACTTGAAGGGTGGGGCCAAAAGGGTCATCATCTCTGCCCCTCCTGTTGATGC
TTCCATGTTTGTAATGGGCATGAACCATGAGAAGTATGGCAACCCCCTCAAGACTGTCAG
CAATGCCTTCTGCGCCACCAACTGCTTGGCCCTTCTGGCTAAAGTCATTCTTGACAACTT
TGGCATCACGGAGGGACTCATG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VNGFGRIGRLVTRAAFNSGKVDIVAINDP-FIDLNYMVYMFQYDSTHGKFNGTVKAENGKLVINGKSISIFQERDPANIKWGDAGAEYVV-ESTGVFTTM
.NGFG..G.LVTRAAFNSGK...V.INDP.FI.LN.MVYMFQYDSTH.K.NGT.K.EN.KLVI.GK.ISIFQE..P..IKWGDA.AEYVV.ESTGVFTTM
Retrocopy
INGFGFTGHLVTRAAFNSGKANTVTINDP/FIHLNHMVYMFQYDSTHSKVNGTIKDENRKLVIHGKPISIFQE*YPVTIKWGDASAEYVV/ESTGVFTTM


Parental protein
EKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLM
.KAGAHLKGGAKRVIISAP..DA.MFVMG.NHEKY.N.LK.VSNA.C.TNCLA.LAKVI.DNFGI.EGLM
Retrocopy
GKAGAHLKGGAKRVIISAPPVDASMFVMGMNHEKYGNPLKTVSNAFCATNCLALLAKVILDNFGITEGLM


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide