RetrogeneDB ID:
retro_mputfur_1463
Organism:
Location:
GL897147.1:1132746-1133186 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
57.24 %
Coverage:
76.68 %
Frameshifts:
4
Stop codons:
4


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1463
ACCTTGTACCAGTCCAATGCCATCTTGTGATATCCAGGCTACTCCCTTAGGCTTTCTGGG
AAGGACCAGTGGGAGGGGGTTCTGGTGCACATGGTGAAGGATGGCATGGAGAATATCCCC
TGCAAATACCTCATCCTCATCTATACAAACTAGGAGTCAGACAAATAGGAGTAAGTGAAG
GCACTACTGGGTACCTGAAGACCTTTGAGACCATACGGTCCCAGAACGAAGGGGATGAGG
ACTTCATCATGGGCAAAAGATTTCCTTTCCAGACTTCAACCTGCTGGACTCATTGCTGAC
TCACCAGGTCCTGACCGTCAGTTGCCTGGACTCATGCCCCGGATCTCAGCCTACCTGGGC
GCCACAGCACCCAGCCCAAGCTCAAGGCCTTCCTGGCCTCCTCTAATCATGAGAACCTCC
CTGTTAATGGCAACTGGAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
TLYQSNAILRHLGRSLGLYGKDQREAALLDVVNDGVEDLRCKYVMLIYTNYEAGKEEYLKAL-PECLKPFEMLLSQNEGGQAFIV-GSQISFADYNLLDL
TLYQSNAIL...G.SL.L.GKDQ.E..L...V.DG.E...CKY..LIYTN.E..K.E..KAL....LK.FE...SQNEG...FI..G..ISF.D.NLLD.
Retrocopy
TLYQSNAIL*YPGYSLRLSGKDQWEGVLVHMVKDGMENIPCKYLILIYTN*ESDK*E*VKAL/TGYLKTFETIRSQNEGDEDFIM/GQKISFPDFNLLDS


Parental protein
LLIHQVLSPSCLDS-HPLLLAYVKRLSARP-KLKAFLASPEHVNRPINGNGK
LL.HQVL..SCLDS..P...AY.......P.KLKAFLAS..H.N.P.NGN.K
Retrocopy
LLTHQVLTVSCLDS/MPRISAYLGATAPSP/KLKAFLASSNHENLPVNGNWK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide