RetrogeneDB ID:
retro_mputfur_149
Organism:
Location:
GL896962.1:2996932-2997823 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
99.66 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
Mitochondrial ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:G9KBA4]

Genomic region (view in browser)





>retro_mputfur_149
ATGGCTGGTAGGGTGCAGGGCGCAGGGGCTCGGGCCCTGGACCTGCTCCGGGCTCTGCCC
CGTGTGAGCTTAGCCAACCTAAAGCCGAATCCGGGCTCCAGGAAACCGGAAAGAAGACGA
AGAGGTCAGAGAAGAGGTAGAAAATGTGGTCGAGGCCATAAAGGAGAGCGTCAGAGAGGA
ACACGGCCCAGACTGGGTTTTGAAGGAGGCCAGACTCCATTTTACCTTCGAATCCCAAAA
TATGGGTTTAATGAAGGTCATAGCTTCAGACGCCAGTATCAGCCTTTGAGTCTCAATAGA
TTGCAATATCTAATTGATTTGGGTCGAGTGGATCCTACTCAGCCTATTGACTTAACTCAG
CTTGTCAATGGGAGAGGTGTGACTGTCCAGCCACTTAAACGGGATTATGGTGTCCAGCTG
GTAGAGGAGGGTGCTGACACCTTTACGGCAAAAGTTAATATTGAAGTACAGTTGGCTTCA
GAATTAGCCATTGCTGCAATCGAAAAAAATGGTGGTGTTGTTACTACAGCTTTCTATGAC
CCCAGAAGTCTAGAAATTCTGTGCAAACCTGTTCCATTCTTTCTACGTGGACAACCCATT
CCAAAACGAATGCTTCCGCCGGAAGCACTGGTACCGTATTATACTGATGCAAAGAATCGT
GGTTACCTGGCCGATCCTGCCAAATTTCCTGAGGCGAGACTTGAACTTGCCAAGAAGTAT
GGCTATGTTTTACCTGATATCACTAAAGATGAACTCTTCAAAATGCTTAGTACTCGAAAG
GATCCAAGGCAGATTTTCTTTGGTCTTGCGCCTGGATGGGTGGTGAATATGGCAGATAAG
AAAATCCTAAAACCTACAGATGAAAATCTCCTCAAGTATTACAGTTCATGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAGRVQGAGARALDLLRALPRVSLANLKPNPGSRKPERRRRGQRRGRKCGRGHKGERQRGTRPRLGFEGGQTPFYLRIPKYGFNEGHSFRRQYQPLSLNR
MAGRVQGAGARALDLLRALPRVSLANLKPNPGSRKPERRRRGQRRGRKCGRGHKGERQRGTRPRLGFEGGQTPFYLRIPKYGFNEGHSFRRQYQPLSLNR
Retrocopy
MAGRVQGAGARALDLLRALPRVSLANLKPNPGSRKPERRRRGQRRGRKCGRGHKGERQRGTRPRLGFEGGQTPFYLRIPKYGFNEGHSFRRQYQPLSLNR


Parental protein
LQYLIDLGRVDPNQPIDLTQLVNGRGVTVQPLKRDYGVQLVEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLEILCKPVPFFLRGQPI
LQYLIDLGRVDP.QPIDLTQLVNGRGVTVQPLKRDYGVQLVEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLEILCKPVPFFLRGQPI
Retrocopy
LQYLIDLGRVDPTQPIDLTQLVNGRGVTVQPLKRDYGVQLVEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLEILCKPVPFFLRGQPI


Parental protein
PKRMLPPEALVPYYTDAKNRGYLADPAKFPEARLELAKKYGYVLPDITKDELFKMLSTRKDPRQIFFGLAPGWVVNMADKKILKPTDENLLKYYSS
PKRMLPPEALVPYYTDAKNRGYLADPAKFPEARLELAKKYGYVLPDITKDELFKMLSTRKDPRQIFFGLAPGWVVNMADKKILKPTDENLLKYYSS
Retrocopy
PKRMLPPEALVPYYTDAKNRGYLADPAKFPEARLELAKKYGYVLPDITKDELFKMLSTRKDPRQIFFGLAPGWVVNMADKKILKPTDENLLKYYSS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide