RetrogeneDB ID:
retro_mputfur_1495
Organism:
Location:
GL897170.1:1416729-1417259 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
82.12 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
NAA20
Parental gene aliases:
No gene alias available
Parental gene description:
N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:15908]

Genomic region (view in browser)





>retro_mputfur_1495
GTGACTACGCTCCGGGCCTTCACATGCGATGACCTGTTCCGCTTCAACAACATTAACTTG
GATCCACTTACAGAAACTTACGGGATTCCTTTTTACTTACAGTACCTTGCCCACTGGCCA
GAGTACTTCATTGTTGTGGAGGCACCTGGTAGAGAGTTAATGGGTTATATCACAGGTAAT
GCAGTAGGCTCAGTAGCTGGGGAAGAATGGCACAGGCACATCACTGCTCTCTCTGTTGCC
CCCAAATTTTGATGCCTTGGTTTGGCTGCTAAAGTTATGGGGTTATTAGGGGAGCTTTCA
GAAGGAAAGGGTGGATTTTTCAGCGATCTCTTTGTAAGAGTGTCTAACCAAGTTGCAGTC
AACGTGCACAAGCAGCTGGGCTACAGCATGTACGGGTCATAGAGTACCACTCGGCCAGCA
ACGAGTAGCCCAATGAGGATGCCTATGATATGAGGAAAGCTCTTTCCAGAGACACTGAGA
GGAAATCTGTCATACCATTACCTCATCCTGTGAGGCCTGAAGACACTGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKAEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEIS
.TTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIV.EAPG.ELMGYI.G.A.GSVA.EEWH.H.TALSVAP.F..LGLAAK.M.LL.E.S
Retrocopy
VTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVVEAPGRELMGYITGNAVGSVAGEEWHRHITALSVAPKF*CLGLAAKVMGLLGELS


Parental protein
ERKGGFFVDLFVRVSNQVAVNMYKQLGYSVY-RTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE
E.KGGFF.DLFVRVSNQVAVN..KQLGYS.Y.R...EY.SASN..P.EDAYDMRKALSRDTE.KS.IPLPHPVRPED.E
Retrocopy
EGKGGFFSDLFVRVSNQVAVNVHKQLGYSMY/RVI-EYHSASNE*PNEDAYDMRKALSRDTERKSVIPLPHPVRPEDTE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide