RetrogeneDB ID:
retro_mputfur_1498
Organism:
Location:
GL897178.1:567498-567774 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
56.84 %
Coverage:
58.12 %
Frameshifts:
2
Stop codons:
2


Parental gene:
Parental gene symbol:
RPL21
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]

Genomic region (view in browser)





>retro_mputfur_1498
GTTACCCAGCATGCTATTAGCATTGTTCTAAACAAACAAACTAAGAGCAAGGTTGTTGCC
AAGAAAATCAATATATGCATTAAGTATACTAAACACAAAGAGTCAGGACAGCTTCCTGAA
GCATGTGAGGGAAAGATGATCAAAAGGAAGGAAGCCAAAAAGAAAAGTACTTAGGTTCAC
CTGAAGTGCCAGCCTACTCCATCCAGAGAAGCACACTTTGGGAAAGCCAATGGAAAGGAG
CCTGAGCTGCTGGAACCTATTCCCTATGAGTTCCTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VTQHAVGIVVNKQ-VKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQK-KKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFM
VTQHA..IV.NKQ......L..........I...KS.DSFLK.V.E...K..KEAK.K.T.V.LK.QP.P.REAHF...NGKEPELLEPIPYEF.
Retrocopy
VTQHAISIVLNKQ\LRARLLPRK-SIYALSILNTKSQDSFLKHVRER*SK/RKEAKKKST*VHLKCQPTPSREAHFGKANGKEPELLEPIPYEFL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide