RetrogeneDB ID:
retro_mputfur_1502
Organism:
Location:
GL897182.1:1359571-1360016 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
78.15 %
Coverage:
53.41 %
Frameshifts:
2
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1502
ATATCCGGAGCTCTTGATGTTCTGCAAATGAAGGAGGAAGATGTCCTCAAATTCCTTGCA
GCAGGAACCCACTTACGTGGTACCAACCTTGACTTCCAAATGAATAGTACATCTACAAAA
GGAAAAGTGATGGCATCTATATCCTAAAACTGAAGAGATCCTGGGAGAAGTTTCTGCTGG
CAGCTCATGCCGCTATTGCCACTGAAAACCCAGCTGATGTCAGTGTCATATCGTCCAGGA
ATATTGGCTAGGGAGCTGTGCTCAAATTTGCTGCTGCTACTGGACCCACTCCTGTTGCCA
GTCGCTTCGCTCCCGAAACCTTTCCTAACCAGACCAGCCAGGCTTCCAAGAGCTGAGACT
TCTAGTGGTTACTGATCCCAGGGCTGAAGACCAGCCTCTTACAGAGCTGTCATATGTTAA
CCTACCTACCACCACTCTGCGTAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQM-EQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPI
.SGALDVLQMKEEDVLKFLAAGTHL.GTNLDFQM.E.YIYKRKSDGIYI..LKR.WEK.LLAA.A..A.ENPADVSVISSRN.G..AVLKFAAATG.TP.
Retrocopy
ISGALDVLQMKEEDVLKFLAAGTHLRGTNLDFQM/E*YIYKRKSDGIYILKLKRSWEKFLLAAHAAIATENPADVSVISSRNIG*GAVLKFAAATGPTPV


Parental protein
AGRFTPGTFTNQI-QAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCN
A.RF.P.TF.NQ..Q..F.E.RLLVVTDPRA..QPLTE.SYVNLPT..L.N
Retrocopy
ASRFAPETFPNQT/QPGFQELRLLVVTDPRAEDQPLTELSYVNLPTTTLRN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide