RetrogeneDB ID:
retro_mputfur_1505
Organism:
Location:
GL897184.1:328411-328694 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
71.58 %
Coverage:
72.31 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
RPS15A
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S15a [Source:HGNC Symbol;Acc:10389]

Genomic region (view in browser)





>retro_mputfur_1505
TTTCCAGCTGTGATGATGAAGCGTGGTTACATGGCTGAATTTGAAACCACTGTTGACCAC
AGTGCTGAGAAAATTGTTGTGAACCTCACGGGCAGGTTAAACAAGTGTGGAATCATCAAC
TCTCAATTTGATGTAAAACTGAAAGATCTAGAAAAATGGCAGAATAAACTTCTCCTGTCC
CACCAGTTTAGTTCCATTGTCCTGACAACCTCAAGTTGGTATTGTGGACCAGGAAGAAGC
AAGATGAAAACCAACAGGAGGGAAACTCCTGGGATTCTTTTTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
FLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSA-GIMDHEEARRKHTGGKILGFFF
F..VMMK.GY..EFE...DH.A.KIVVNLTGRLNKCG.I...FDV.LKDLEKWQN.LL.S.QF..IVLTTS..GI.D.EEAR.K.TGGK.LGFFF
Retrocopy
FPAVMMKRGYMAEFETTVDHSAEKIVVNLTGRLNKCGIINSQFDVKLKDLEKWQNKLLLSHQFSSIVLTTSS\GIVDQEEAR*KPTGGKLLGFFF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide