RetrogeneDB ID:
retro_mputfur_1514
Organism:
Location:
GL897199.1:741924-742503 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
65.84 %
Coverage:
51.02 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1514
ATCAACACTATCATCATTGGGCACATAAATTTGGGCCAATCCTCCACTCCTGGCCATCTG
ATCTATAAATGTGGTGGGATCGACCTAAGAACCATTGAAAAGGAGGCTGCTGAGATGGCA
AAGAGCTCCTTCAAGTCTGCCAGGGTGTCAGACAAACGGCCAAAAGTGAGTGTGGTGGTT
TTTGGTATCTCCCCTTAGAAACTGGAGAACAGCAAGTATTATGTGAGTATCATTGATGTC
CCAAAACACAGAGCATTCATCAATAATGTGAGTACAGGCACATCTCAGGCTGACTGTGAT
GTCCTGATTATTGCTGCTCTTGTTGGTGAACTTGAAACAGGCATCTCCAAAAATGGGCAG
ACCCATGAGCATGACCCTTCTGGCTGACACACTGGGTGTGAAACAGCTAATGGTTTACAA
AATGGATTCCACTGAGCCACCTGCTGCCAGAAGAGACACAAGGAATATGTTAAGGAAGCC
AGCACATATATTAAGAAATTTGGCTACAACCCCAGCACAGTAGCATTTGTGCCAGTTTCT
GGCTGGAGTGATGACAAAATGCTGGAGCCAAATCCTAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTS
IN...IGH...G.S.T.GHLIYKCGGID.RTI...EKEAAEM.K.SFK.A.V.D..K..........IS..K.E.SKYYV.IID.P.HR.FI.N..TGTS
Retrocopy
INTIIIGHINLGQSSTPGHLIYKCGGIDLRTI---EKEAAEMAKSSFKSARVSD--KRPKVSVVVFGISP*KLENSKYYVSIIDVPKHRAFINNVSTGTS


Parental protein
QADCAVLIVAAGVGEFEAGISKNGQTREH-ALLAYTLGVKQLIVGVNKMDSTEPPYS-QKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPS
QADC.VLI.AA.VGE.E.GISKNGQT.EH..LLA.TLGVKQL...V.KMDSTEPP...QKR..E.VKE.STYIKK.GYNP.TVAFVP.SGW..D.MLEP.
Retrocopy
QADCDVLIIAALVGELETGISKNGQTHEH\TLLADTLGVKQLM--VYKMDSTEPPAA/QKRHKEYVKEASTYIKKFGYNPSTVAFVPVSGWSDDKMLEPN


Parental protein
AN
.N
Retrocopy
PN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide