RetrogeneDB ID:
retro_mputfur_152
Organism:
Location:
GL897410.1:34379-35528 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
67.12 %
Coverage:
55.15 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_152
ATGGGGAGTGGAGAGCCTAATTCTGCTGGCAAGAAAAAGAAGTACCTAAAGGCTGCCCTG
TACGTGGGTGACTTGGACCCAGATGTCACGGAGGATATGCTATATAAAAAGTTCAGGCCT
GCTGGTCCTCTGCGCTTCACCCGAATATGCCGTGACCCCGTGACCCGCAGCCCCCTGGGC
TATGGCTATGTTAACTTCCGCTTTCCTGCAGATGCTGAGTGGGCCCTGAATACGATGAAT
TTTGACTTAATTAATGGCAAACCTTTCCGCCTCATGTGGTCTCAGCCAGATGACCGCTTA
AGAAAGTCTGGAGTTGGAAATATATTCATCAAAAACCTGGATAAATCCATAGACAATAGG
GCTCTTTTTTATTTATTTTCTGCCTTTGGGAACATTCTCTCCTGCAAAGTCGTATGTGAT
GACAATGGTTCTAAAGGTTATGCCTATGTGCACTTTGATAGCCTGGCCGCTGCCAATAGA
GCCATCTGGCACATGAATGGATTGCGGCTTAACAACCGCCAGGTGTATGTTGGCAGATTC
AAATTCCCAGAAGAGCGGGCAGCTGAAGTCAGAACCAGGGATAGAGCGACTTTCACCAAT
GTTTTTGTTAAAAACTTTGGAGATGACTTGGATGACGAACAACTGAAGGAAATCTTTAGT
GGCTATGGGCCAACTGAGAGTGTTAAGGTTATAAGAGATGCCAGTGGGAAATCTAAGGGC
TTTGGATTTGTGAGGTATGAGACACACGAGGCTGCCCAAAAGGCTGTATTAGACCTGCAT
GGAAAGTCCATCAATGGGAAAGTTCTATATGTAGGGCGGGCACAGAAGAAAATTGAACGA
TTGGCTGAGTTAAGACGAAGATTTGAACGACTGAGATTAAAAGAAAAAAGTCGGCCTCCG
GGGGTGCCTATCTATATTAAGAACCTGGATGAGACCATCGATGATGAAAAACTGAAGGAG
GAATTTTCTTCCTTTGGATCAATTAGCCGGGCCAAAGTGATGGTGGAAGTAGGGCAAGGC
AAAGGGTTTGGTGTTGTCTGCTTCTCCTCTTTTGAAGATGCTACCAAAGCAGTGGATGAG
ATGAATGGTCGCACAGTGGGCTCTAAGCCCCTGCATGTTACCCTGGGCCAGGCCAGGCGC
AGGTGGTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
YPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLD
Y..A.LYVGDL..DVTE.MLY.KF.PAGP....R.CRD..TR..LGY.YVNF..PADAE.AL.TMNFD.I.GKP.R.MWSQ.D..LRKSGVGN.FIKNLD
Retrocopy
YLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLD


Parental protein
KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAK-EFTNVYIKNFGEEVDDES
KSIDN.AL...FSAFGNILSCKVVCD.NGSKGYA.VHF....AA..AI..MNG..LN.R.V.VGRFK...ER.AE........FTNV..KNFG...DDE.
Retrocopy
KSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGLRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNFGDDLDDEQ


Parental protein
LKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTID
LKE.FS..G.T.SVKV.RD.SGKSKGFGFV.YE.HE.A.KAV....GK.I.GKV..VGRAQKK.ER.AEL.R.FE.L.....SR..GV..YIKNLD.TID
Retrocopy
LKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETID


Parental protein
DEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK
DEKL..EFS.FGSI..AKVM.E.G..KGFG.VCFSS.E.ATKAV.EMNGR.VGSKPL.V.L.Q..
Retrocopy
DEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEDATKAVDEMNGRTVGSKPLHVTLGQAR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide