RetrogeneDB ID:
retro_mputfur_1522
Organism:
Location:
GL897205.1:163890-164273 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
74.24 %
Coverage:
87.76 %
Frameshifts:
3
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1522
GAGCAATAAAAAGAGGATCAATTAGGAGTAGGAGTTGGCAGTGTTTGCTGGGGTCTGGAA
GATGATGAACACAACACTTATAAGATGGACAGGGATGATAATTGGGCCTCTAGAAACAAT
TTATGAAAACCAAATATACAGTCTTAAGATAGAATGTGGATCTAAATACCCAGAAACATC
CCCCTTTGTAGATTTATAGCAAAAATTAATATGAATGGAGTTAATGTTCTAGTGGAGTGG
TGGACCCAAGAGTCATATCAGTGCTAGCAAAGTGGCAGAATTCATATAGCATCAAAGTTG
TCCTGTAAAAGCTCCAGTGTCTAAGGATGTCTAAAGAAAACATGAAACTCTCTCAGCCAC
CTGAAGGACAGTGTTACAATAAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EELEEGQKGVGDGTVSWGLEDDED-MTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFV-RFVTKINMNGVN-SSNGVVDPRAISVLAKWQNSY
E...E.Q.GVG.G.V.WGLE.D....TL.RWTGMIIGP..TIYEN.IYSLKIECG.KYPE..PFV.RF..KINMNGVN..S.GVVDPR.ISVLAKWQNSY
Retrocopy
EQ*KEDQLGVGVGSVCWGLE-DDE\TTLIRWTGMIIGPLETIYENQIYSLKIECGSKYPETSPFV/RFIAKINMNGVN/CSSGVVDPRVISVLAKWQNSY


Parental protein
SIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
SIKVVL..L..L.MSKENMKL.QPPEGQCY.N
Retrocopy
SIKVVL*KLQCLRMSKENMKLSQPPEGQCYNN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide