RetrogeneDB ID:
retro_mputfur_1533
Organism:
Location:
GL897218.1:946087-946362 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
68.75 %
Coverage:
54.29 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
RPS10
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S10 [Source:HGNC Symbol;Acc:10383]

Genomic region (view in browser)





>retro_mputfur_1533
CATTTCTATCGGGAGTTTACCAAGGAAGGTATCCAGTATCTCTGTGATTACCTCCACCTG
CCACCGGAGATTGTGCCTGCCACTCTGCGCTCCAGCCATCCTGACACTGGCAAGCCACAG
CCCAAAGGTGTGGAAGGATAGCAGCCTGTAAGAATCACACAAGGGGAAGCTGACAGAGAC
ACCTACGGATCAAGCGCTGTGCCCCTTGGTGCGAACAAGAGAGCAAAGGCTGGGGCTGTG
TCGGTAACCGAATTCCGGTTAGAGGAGGATTTGGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
HFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKVCIGLEGERPARLTRGEADRDTYRRSAVPPGADKKAEAGAGSATEFQF-RGGFG
HFY...T.EGIQYL.DYLHLPPEIVPATLR.S.P.TG.P.PK...G.EG..P.R.T.GEADRDTY..SAVP.GA.K.A.AGA.S.TEF...RGGFG
Retrocopy
HFYREFTKEGIQYLCDYLHLPPEIVPATLRSSHPDTGKPQPK---GVEG*QPVRITQGEADRDTYGSSAVPLGANKRAKAGAVSVTEFRL/RGGFG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide