RetrogeneDB ID:
retro_mputfur_1537
Organism:
Location:
GL897223.1:1104663-1104984 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.14 %
Coverage:
72.3 %
Frameshifts:
2
Stop codons:
2


Parental gene:
Parental gene symbol:
TMEM216
Parental gene aliases:
No gene alias available
Parental gene description:
transmembrane protein 216 [Source:HGNC Symbol;Acc:25018]

Genomic region (view in browser)





>retro_mputfur_1537
CCCATGGAAAATCTGTTCTTTCTGAGTGGGTGGTCATATGCTACCTATTCCTGCTGGAAC
TCTTCATATTTCTGTATGAAGCTGTCCTGCTACCATCTCCAATAGCTGATCTAGCAGTGG
ATGTGGTGATACCTCTCCTGAGCCTTGGAATTGAAGGAGTGTGAGTCTTTCTTGGTGCAA
AGGGAAATCTTTGCCATTGAAAGATGGCACTTGGTATTAGGATGGACTTGACCTTCCCAT
CTGCCATGCTGTCCTCCTACTGCCTGCTACTGCAGACTTCCATGCTTTTGCCAGGATGTC
ATCATGAACAGCACCTTGCTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PLEILFFLNGWYYATY-FLLELFIFLYKALLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLR-L
P.E.LFFL.GW.YATY.FLLELFIFLY.A.LLP.P.A.L..DVV..LL.LGIE....F.G.KGNLC..KM.LGI...LTFPSAM..SY.LLLQT..L...
Retrocopy
PMENLFFLSGWSYATY/FLLELFIFLYEAVLLPSPIADLAVDVVIPLLSLGIEGV*VFLGAKGNLCH*KMALGIRMDLTFPSAMLSSYCLLLQTSMLL\Q


Parental protein
EAIMNSILL
..IMNS.LL
Retrocopy
DVIMNSTLL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide