RetrogeneDB ID:
retro_mputfur_154
Organism:
Location:
GL896976.1:6612232-6612880 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
94.86 %
Coverage:
99.53 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_154
ATGAGCAGCTCAGAGGAGGTGTCCTCGATTTCCTGGTTCTGTGGGCTCCGTGGCAATGAA
TTTTTCTGTGAAGTGGATGAGGACTACATCCAGGACAAATTCAATCTCACTGGACTCAAT
GAGCAGGTGCCTCACTATCAACAAGCTCTAGACATGATCTTAGACCTAGAGCCTAATGAA
GAGCTGGAAGACAACCCCAACCAGAGTGACCTGATTGAGCAGGCAGCCGAGATACTTTAT
GGATTGATCCATGCCCGCTCTATCCTCACCAACCGTGGCATCGCCCAGATGTTGGAAAAG
TACCAGCAGGGAGACTTTGGCTATTGTCCCCGTGTGTACTGTGAGAACCAGCCAATGCTT
TCCATCAGCCTTTCGGACATCCCAGGTGAGGCCATGGTGAAGCTCTACTGCCCCAAGTGC
ATGGACGTGTACACACCCAAGTCATCAAGGCACCATCACACGGACGGCGCCTACGTCGGC
ACTGGTTTCCCTCACATGCTCTTCATGGTGCACCCGGAGTACCAGCCCAAGCAGCCCGCC
AACCAGTTTGTACCCAGGCTTTACAGTTTCAAGATCCATCCAATGGCCTACCAACTGCAG
CTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACAATTTGCTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEK
MSSSEEVS.ISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHY.QALDMILDLEP.EELEDNPNQSDLIEQAAE.LYGLIHAR.ILTNRGIAQMLEK
Retrocopy
MSSSEEVSSISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYQQALDMILDLEPNEELEDNPNQSDLIEQAAEILYGLIHARSILTNRGIAQMLEK


Parental protein
YQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQ
YQQGDFGYCPRVYCENQPML.I.LSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAY.GTGFPHMLFMVHPEY.PK.PANQFVPRLY.FKIHPMAYQLQ
Retrocopy
YQQGDFGYCPRVYCENQPMLSISLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYVGTGFPHMLFMVHPEYQPKQPANQFVPRLYSFKIHPMAYQLQ


Parental protein
LQAASNFKSPVKTI
LQAASNFKSPVKTI
Retrocopy
LQAASNFKSPVKTI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide