RetrogeneDB ID:
retro_mputfur_1566
Organism:
Location:
GL897258.1:292723-293413 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.7 %
Coverage:
85.5 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1566
CGGCAGCGGCATCTGGGCCGGGGCCGAGGCCGCGGAGCTCGCGGTGGCAAGGCCGAGGAC
AAGGAGTGGATCCCTGTCACCAAGCTGGGCCGCCTGGTCAAGGACATGAAGATCAAGTCC
CTGGAGGAGATCTATCTCTTCTCCCTGCCCATCAAGGAGTCTGAGATCATCGACTTCTTC
CTGGGAGCCTCCCTCAAGGACGAGGTCTTGAAGATCATGCCTGTGCAGAAGCAGACGCGC
GCGGGCCAGCGGACCAGGTTCAAGGCATTTGTCGCCATCGGAGATTACAATGGACACGTC
GGTTTGGGTGTCAAGTGCTCCAAGGAGGTAGCTACTGCCATCCGCGGAGCCATCATTCTG
GCGAAGCTTTCCATTGTCCCTGTGCGGCGAGGCTACTGGGGGAACAAGATCGGCAAGCCC
CACACTGTCCCGTGCAAGGTGACTGGCCGCTGTGGCTCTGTGCTGGTGCGTCTCATCCCC
GCCCCCAGAGGCACTGGCATTGTCTCGGCCCCTGTGCCCAAGAAACTGCTGATGATGGCT
GGTATTGACGACTGCTACACCTCGGCCAGAGGCTGCACTGCCACCCTAGGGAACTTTGCC
AAGGCTACTTTCGATGCCATCTCCAAGACCTACAGCTATCTCACCCCTGATCTCTGGAAG
GAGACTGTGTTCACCAAGTCTCCCTATCAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RGRGRGRGRGRGARGGKAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHV
R.R..GRGRGRGARGGKAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHV
Retrocopy
RQRHLGRGRGRGARGGKAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHV


Parental protein
GLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFA
GLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFA
Retrocopy
GLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFA


Parental protein
KATFDAISKTYSYLTPDLWKETVFTKSPYQ
KATFDAISKTYSYLTPDLWKETVFTKSPYQ
Retrocopy
KATFDAISKTYSYLTPDLWKETVFTKSPYQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide