RetrogeneDB ID:
retro_mputfur_1570
Organism:
Location:
GL897263.1:21877-22158 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
54.55 %
Coverage:
94.23 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
ATPIF1
Parental gene aliases:
No gene alias available
Parental gene description:
ATPase inhibitory factor 1 [Source:HGNC Symbol;Acc:871]

Genomic region (view in browser)





>retro_mputfur_1570
ATGGCTGTCACAACTTTGGCTGTCCAGGTGCGGCTTGGCATGTGGGGCATTAGGTCATGT
AAACCCGAGGCTTCAGCTTCAAATGGTAAGACTTCCACATGGGCTTGGTCTGGGAGGCAC
GTAGGGCCTTCAGAAAGAGGGAGCAAGCTGAAGAGGAAGGATACTCTCCCAAAGAACAAC
TGACAACTTTGAAAAAACAACGTGAAGAGGAGATCACCAGTCATATAAAGGAAATTGAGG
CTCTGCAGAAAGAAATCAAGTGGTGCAAGACAATCAAACAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAVATSAARIWLGVGGFRALQ-ARGFSSERPDSSAGSIREAGGAFGKREQAEEERYFRARTKEQLAALKKHHEEEITHHLKEIERLQKEIERHKKKIKH
MAV.T.A....LG..G.R.....RGFS....D...G...EA..AF.KREQAEEE.Y.....KEQL..LKK..EEEIT.H.KEIE.LQKEI....K.IKH
Retrocopy
MAVTTLAVQVRLGMWGIRSCK/TRGFSFKW*DFHMGLVWEARRAFRKREQAEEEGY---SPKEQLTTLKKQREEEITSHIKEIEALQKEI-KWCKTIKH


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide