RetrogeneDB ID:
retro_mputfur_1575
Organism:
Location:
GL897271.1:489172-489415 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
51.81 %
Coverage:
59.85 %
Frameshifts:
0
Stop codons:
3


Parental gene:
Parental gene symbol:
ATP5G1
Parental gene aliases:
No gene alias available
Parental gene description:
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) [Source:HGNC Symbol;Acc:841]

Genomic region (view in browser)





>retro_mputfur_1575
ATGTAGACCACCAAGGCACTACTCATTTACCTAGCACTGATCCACTGTTGTAGCTGGCCT
ATGTCTAATCAGGCCTGTGTCTGCCTCTTTCTTCACAAGCCATGGATCCCACCTAAACAG
CCTTCCTAGAGTATATCTCCACACTAGGTGGTCCAGAGGGAGTTCCAGACCAGTCTTTTC
TCTCAGGACAAGGACATAGAAGCCAAGCTTCTTGCTGCTGCAGCCACCACAGTTGTGGCT
GGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MQTTGALLISPALIRCCTRDLIRPVSASL-LSRPDIPAKQPSYSSNSPLQVARREFQTSVVSRDIDTAAKFIGAGAATVGVAG
M.TT.ALLI..ALI.CC...........L.L..P.IP.KQPS.S..SP..V..REFQTS..S.D.D..AK...A.A.TV.VAG
Retrocopy
M*TTKALLIYLALIHCCSWPMSNQACVCLFLHKPWIPPKQPS*SI-SPH*VVQREFQTSLFSQDKDIEAKLLAAAATTV-VAG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide