RetrogeneDB ID:
retro_mputfur_1580
Organism:
Location:
GL897276.1:586893-587451 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
68.56 %
Coverage:
98.96 %
Frameshifts:
3
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1580
GCTCAGAGTAGGCAGAGGTACAATTGACTTCAGTCATCCTGAATCCTGGTTTATCAGACA
CCAGCCGCCTCAACCATGCCACCCACATTCAACCCCAATGAGATCAAACTTATATTTCTG
ATGTGCACCAGTGGCGAAGTTGATGCCACATCTCTCTGGCCCTGAAGATCAACCTCCTGG
GTCTGTCTTCAAAAAGCGTTGGTGATGACATCCCTCCTAGTGACTGGAGGGTCTGAGGAT
GACAGTAAAACTGACCATTCAGAATAGACAAGCCCAGATTGAAGCAGTACCTTCTGCCTC
TGTCCTAATTATCAAAGCCCTCAAGGAATCATCAAGAGATAGAATGAAGGAGAAAAACAG
TAAGCACAGTGGAAATACCACTTTTGATGAGATTGTCAGTATTGCCTGGCAGATAGGGCA
CTGATTTTTAGCCAGAGAATTCTCTGGAACCATTAAAGAGATCCTGGGGACTGCCCAGTC
TATGTGCTGCCATGTTGATGGCCATGACCATCATGACATCCTAGATGGCATCAGAGTGGT
GCAGTGGAATGCCTGGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ARRRQRCNSLRSSRIRVHPTPATSAMPPKFDPNEIKVVYLRCTGGEVGATS-ALAPKIGPLGLSPKKVGDDIAKATGDWK-GLRITVKLTIQNRQAQIEV
A..RQR.N.L.SS.I.V..TPA.S.MPP.F.PNEIK...L.CT.GEV.ATS..LA.KI..LGLS.K.VGDDI.....DW..GLR.TVKLTIQNRQAQIE.
Retrocopy
AQSRQRYN*LQSS*ILVYQTPAASTMPPTFNPNEIKLIFLMCTSGEVDATS/SLALKINLLGLSSKSVGDDIPPS--DWR/GLRMTVKLTIQNRQAQIEA


Parental protein
VPSASALIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDI-NSGAVECPA
VPSAS.LIIKALKE..RDR.K.KNS..KHSGN.TFDEIV.IA.Q..H..LARE.SGTIKEILGTAQS..C.VDG...HDI.D.I..SGAVEC.A
Retrocopy
VPSASVLIIKALKESSRDRMKEKNS--KHSGNTTFDEIVSIAWQIGH*FLAREFSGTIKEILGTAQSMCCHVDGHDHHDILDGI/QSGAVECLA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide