RetrogeneDB ID:
retro_mputfur_1581
Organism:
Location:
GL897277.1:66730-67348 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
90.38 %
Coverage:
71.72 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1581
AATAGACTTAATGAACAAGCCAGTGAGGATATTTTGAAAGTAGAACAGAAATATAACAAA
CTCCACCAACCATTTTTTCAGAAGAGGTCAGAATTGATCGCCAAAATCCCCAATTTTTGG
TTAACAATATCTGTCAACCATCTACAAGTGTCTGCACTGCTTGGGGAGGAGGATGAAGAG
GCATTGCATTATTTGACAAGAGTTGAAGTGACAGAATTTGAAGATATTAAATCAGGTTAC
AGAATAGATTTTTATTTTGATGAAAACCCTTACTTCAAAAATAAAGTTCTCTCCAAAGAA
TTTCATCTGAATGAGAGTGGTGATCCATCTTCAAAGTCCACTGAAATCAAATGGAAATCT
GGAAAGGATTTGACAAAACGTTCATGTCAACCACAGAATAAAACCAGCAGGAAGAGACAG
CATGAGGAACCAGAGAGCTTCTTTACCTGGTTTACTGACCATTCTGATGCAGGTGCAGAT
GGATTAGGAGAGGTCATCAAAGATGATATTTGGCCAAATCCATTACAGTACTACTTGGTT
CCCAATATGGATGACGAAGAAGGGGAAGAAGAGGGTGATGATAATGATGAAGAAGAAGGA
TTGGAAGATATGGATGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
DRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKE
.RLNEQASE.ILKVEQKYNKL.QPFFQKRSELIAKIPNFW.T..VNH.QVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYF.NKVLSKE
Retrocopy
NRLNEQASEDILKVEQKYNKLHQPFFQKRSELIAKIPNFWLTISVNHLQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFKNKVLSKE


Parental protein
FHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEEDDDDDEEE
FHLNESGDPSSKSTEIKWKSGKDLTKRS.Q.QNK.SRKRQHEEPESFFTWFTDHSDAGAD.LGEVIKDDIWPNPLQYYLVP.MDDE..EGEE..DD..EE
Retrocopy
FHLNESGDPSSKSTEIKWKSGKDLTKRSCQPQNKTSRKRQHEEPESFFTWFTDHSDAGADGLGEVIKDDIWPNPLQYYLVPNMDDE--EGEEEGDDNDEE


Parental protein
EGLEDIDE
EGLED.DE
Retrocopy
EGLEDMDE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide