RetrogeneDB ID:
retro_mputfur_1589
Organism:
Location:
GL897289.1:393832-394304 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
83.95 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1589
ATGGCTGGGTGAAAACTTGCTCTAAAAACCATTGACTAGGTAGTTTTTGGTGAGATCATA
CCCCAAAACCAGAAGGCCATCGCTAAACTTCCTGAAATCTTGGTATGAGACACTTACCTC
CAAGTTGGATACTCTCCCTAAGAAAGTCCTTGCTATTAACTGAGCTTACTACAAAACCAA
TGTGGTGAATGCTGGCTTGGTAGATGACTTTGAGAAGAAGTTCAATGCCCTGAAGATTCC
TGTGCCAGAGGATAAATACACTGTTCAGGTGGACGCTGAAGAAAAAGAAGATGTAAAAAG
TTGTGCTGAGTTTTTGTCTCTCTCAAAGGCCAGGATTATGGAATACAAAAAACAGCTGGA
GAAGCTAAGGAATGTAATTCTGTTTGATCAGATGACCATTGAGGACCTAAATGAAGCCTT
CTTGTCTAAGAAGAAGTATACCTATTGGCCTCACAAGCCAATCGAAAACTTA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAGRKLALKTIDWVAFGEIIPRNQKAIA-NSLKSWNETLTSKLATLPEKPPAIDWAYYKANVAKAGLVDDFEKKFNALKIPVPEDKYTVQVDAEEKEDVK
MAG.KLALKTID.V.FGEIIP.NQKAIA.N.LKSW.ETLTSKL.TLP.K..AI..AYYK.NV..AGLVDDFEKKFNALKIPVPEDKYTVQVDAEEKEDVK
Retrocopy
MAG*KLALKTID*VVFGEIIPQNQKAIA\NFLKSWYETLTSKLDTLPKKVLAIN*AYYKTNVVNAGLVDDFEKKFNALKIPVPEDKYTVQVDAEEKEDVK


Parental protein
SCAEFLSLSKARIVEYEKQLEKLRNIIPFDQMTIEDLNEAFPETKLDKKKYPYWPHKPIENL
SCAEFLSLSKARI.EY.KQLEKLRN.I.FDQMTIEDLNEAF....L.KKKY.YWPHKPIENL
Retrocopy
SCAEFLSLSKARIMEYKKQLEKLRNVILFDQMTIEDLNEAF----LSKKKYTYWPHKPIENL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide