RetrogeneDB ID:
retro_mputfur_1590
Organism:
Location:
GL897290.1:580997-581456 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
93.46 %
Coverage:
84.07 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1590
GCCATGGCCCACCAGGAGCGCACGTTCATCGCCATCAAGCCGGATGGCGTGCAGCACAGC
CTGGTGGGCGAGATCATCAAGCACTTCGAGCAGAAGGGGTTCCACCTCGTGGCCATGAAG
TTCCTGCAGGCCTCTCAGGAGCTCCTGAAGCAGCACTACATTGACCTGAAGGACCGTCCC
TTCTTCCCAGGGCTGGTGAAGTACATGAACTCCGGGCCGGTTGTGGCCATGGTCTGGGAG
GTACTGAATATGGTGAAGATGGGGCAGATGATGCTTGGGGAGACCAACCCAGCGGATTCT
AAACCAGGCACCATTCGTGGGGTCTTCTGCATTCAAGTTGGCAGGAACATCATTCATGGC
AGTAATTCAGTGAAAAGTGCGGAGAAAGAAATCAGCCTTTGGTTCAAGCCTGAAGAGTTG
GTGGATTACAAGTCTTGTGCTTTTGACTGGATCTATGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AMAHQERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLQASQELLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRMMLGETNPADS
AMAHQERTFIAIKPDGVQ..LVGEIIK.FEQKGF.LVAMKFLQASQELLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWE.LN.VK.G.MMLGETNPADS
Retrocopy
AMAHQERTFIAIKPDGVQHSLVGEIIKHFEQKGFHLVAMKFLQASQELLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEVLNMVKMGQMMLGETNPADS


Parental protein
KPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVDYKSCAFDWIYE
KPGTIRG.FCIQVGRNIIHGS.SVKSAEKEISLWFKPEELVDYKSCAFDWIYE
Retrocopy
KPGTIRGVFCIQVGRNIIHGSNSVKSAEKEISLWFKPEELVDYKSCAFDWIYE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide