RetrogeneDB ID:
retro_mputfur_160
Organism:
Location:
GL896907.1:4733555-4734347 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
94.66 %
Coverage:
99.62 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_160
ATGGCTCGTGGTCCCAAGAAACATCTGAAGCGTGTAGCAGCTCCAAAGCATTGGATGCTG
GACAAACTGACTGGTGTGTTTGCTCCTTGCCCATCTACTGGTCCCCATAAGCTGAGAGAG
TGTCTCCCTCTCATCATTTTCTTAAGGAACAGACTTAAGTATGCCCTAACAGGAGATGAA
GTAAAGAAGATCTGTATGCAGCGTTTTATTAAGATTGATGGCAAGGTCCAAACTGATATA
ACATACCCTGATGGTTTTATGGATGTCATCAGCATTGACAAGACCGGAGAGAATTTCCAT
CTGATCTATGATACCAAGGGTCGCTTTGCCATTCATTGGATTACACTCGAGGAGGCCAAG
TACAAGTTGTGCAAAGTAAGAAAGATCTTTGTGGGGACAAAAGGAATCCCCCATCTGGTG
ACTCATGATGCTCGCACCATCCGCTATCCTGATCCCCTCATCAAGGTCAATGACACCATT
CAGATTGATTTGGAAACCGGAAAGATTACTGATCTCGTCAAGTTTGACACTGGTAATCTG
TGTATGGTGACTGGGGGTGCTAACCGGGGAAGAACTGGTGTGATCACCAACACAGAGAGA
CACCCTGGTTCATTTGATGTGGTTCACGTGAAAGATGCCAATGGCAACAGCTTTGCCACC
CAACTCTCCAACATTTTTGTTATTGGCAAAGGCAACAAACCATGGATTTCTCTTCCCCGT
GGAAAGGGTATCCGCCTCACCATTGCTGAAGAGAGAGACAAGAGACTGGCAGGCAAACAG
AGCAGCGGGTAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRL
ARGPKKHLKRVAAPKHWMLDKLTGVFAP.PSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKV.TDITYP.GFMDVISIDKTGENF.L
Retrocopy
ARGPKKHLKRVAAPKHWMLDKLTGVFAPCPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVQTDITYPDGFMDVISIDKTGENFHL


Parental protein
IYDTKGRFAVHRITLEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERH
IYDTKGRFA.H.ITLEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITD..KFDTGNLCMVTGGAN.GR.GVITN.ERH
Retrocopy
IYDTKGRFAIHWITLEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDLVKFDTGNLCMVTGGANRGRTGVITNTERH


Parental protein
PGSFDVVHVKDANGNSFAPRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG
PGSFDVVHVKDANGNSFA..LSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLA.KQSSG
Retrocopy
PGSFDVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAGKQSSG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide