RetrogeneDB ID:
retro_mputfur_1613
Organism:
Location:
GL897366.1:155693-155918 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.82 %
Coverage:
67.54 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
RPLP1
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372]

Genomic region (view in browser)





>retro_mputfur_1613
TCAGTAGAACCTTTCTGGCCAGGCTTGTTTGTAAAGGCCCTGGACAATGTCATCAGGAGC
TTCGCCAACAACATTAGGGCAGGTGAACCTGCCCAGCAGCTCCCTCCGCATCAGCAGGAG
GTCCTTCTCTCTCTTCCATCACTGCCTCAGCTGAGGAGAAGAAAATGGGAAGAGAAAGAA
GAATCTGAGGAGTGTGATGATGACATGAACTTTGGTCTTTTTGAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
NVEPFWPGLFAKALANVNIGSLICNVGAGGPA-PAAGAAPAGGPAPSTAAAPAEEKKV-EAKKEESEESDDDMGFGLFD
.VEPFWPGLF.KAL.NV.I.S...N..AG.PA.PAA..A.AGGP..S...A.AEEKK..E.K.EESEE.DDDM.FGLFD
Retrocopy
SVEPFWPGLFVKALDNV-IRSFANNIRAGEPA/PAAPSASAGGPSLSSITASAEEKKM\EEK-EESEECDDDMNFGLFD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide