RetrogeneDB ID:
retro_mputfur_162
Organism:
Location:
GL896966.1:6407773-6408586 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.52 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_162
ATGGCGGCGTCTTCAAGTGGAGAGAAGGAGAAAGAGCGGCCGGGAGGCGGTTCTGGAGCG
GCCGGCGGTAACAGCACGCGAGAGCGACTGCTGTCTGCCCTGGAAGATCTGGAGGTCTTG
TCGAGAGAACTTATAGAAATGTTAGCAATTTCAAGAAACCAAAAGTTATTGCCACCTGAT
GAGGAAAACCAGGTCCTGGAGTTGTTAATTCACAGAGATGGGGAATTTCAAGAACTGATG
AAATTGGCAGTCAATCAGGGAAAAATCCATCATGAAATGCAAGTTTTAGAAAAGGAAGTG
GAGAAGAGAGACCGTGATATTCAGCAACTACAAAAACAGCTCAAGGAAGCAGAACAAATA
CTGGCAACAGCTGTTTACCAAGCAAAAGAAAAACTCAAATCAATAGAAAAAGCAAGAAAA
GGTGCCATCTCCTCTGAAGAAATAATTAAGTATGCACATAGGATTAGTGCAAGTAATGCT
GTATGTGCCCCACTGACCTGGGTTCCAGGGGACCCACGGAGGCCGTACCCAACTGATTTG
GAGATGAGAAGTGGATTATTGGGTCAAATGAACAATCCTTCCACTAATGGTGTAAATGGT
CATTTACCAGGGGATGCACTTGCAGCAGGCAGATTGCCAGATGTCCTTGCTCCACAATAT
CCATGGCAGTCAAATGACATGTCAATGAATATGTTACCACCAAATCACAGTAATGACTTT
TTGTTGGAACCTCTGGGCCATAATAAAGAAAATGAAGATGATGTAGAAGTTATGTCAACA
GACTCCTCTAGCAGCAGTAGTGACTCTGATTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAASSSGEKEKERPGGGSGAAGGNSTRERLLSALEDLEVLSRELIEMLAISRNQKLLPPDEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEV
MAASSSGEKEKERPGGGSGAAGGNSTRERLLSALEDLEVLSRELIEMLAISRNQKLLPPDEENQVLELLIHRDGEFQELMKLA.NQGKIHHEMQVLEKEV
Retrocopy
MAASSSGEKEKERPGGGSGAAGGNSTRERLLSALEDLEVLSRELIEMLAISRNQKLLPPDEENQVLELLIHRDGEFQELMKLAVNQGKIHHEMQVLEKEV


Parental protein
EKRDSDIQQLQKQLKEAEQILATAVYQAKEKLKSIEKARKGAISSEEIIKYAHRISASNAVCAPLTWVPGDPRRPYPTDLEMRSGLLGQMNNPSTNGVNG
EKRD.DIQQLQKQLKEAEQILATAVYQAKEKLKSIEKARKGAISSEEIIKYAHRISASNAVCAPLTWVPGDPRRPYPTDLEMRSGLLGQMNNPSTNGVNG
Retrocopy
EKRDRDIQQLQKQLKEAEQILATAVYQAKEKLKSIEKARKGAISSEEIIKYAHRISASNAVCAPLTWVPGDPRRPYPTDLEMRSGLLGQMNNPSTNGVNG


Parental protein
-LPGDALAAGRLPDVLAPQYPWQSNDMSMNMLPPNHSNDFLLEPPGHNKENEDDVEVMSTDSSSSSSDSD
.LPGDALAAGRLPDVLAPQYPWQSNDMSMNMLPPNHSNDFLLEP.GHNKENEDDVEVMSTDSSSSSSDSD
Retrocopy
HLPGDALAAGRLPDVLAPQYPWQSNDMSMNMLPPNHSNDFLLEPLGHNKENEDDVEVMSTDSSSSSSDSD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide