RetrogeneDB ID:
retro_mputfur_1623
Organism:
Location:
GL897397.1:77094-77463 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
51.18 %
Coverage:
53.25 %
Frameshifts:
4
Stop codons:
5


Parental gene:
Parental gene symbol:
NDUFV2
Parental gene aliases:
No gene alias available
Parental gene description:
NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa [Source:HGNC Symbol;Acc:7717]

Genomic region (view in browser)





>retro_mputfur_1623
AGGGAACTTGCCTAAAAAGCTATGCAAAATGGAGCTAGAAGATCCTTATTTGTCCACAGA
AATAATCCTGAGAATAAGCCAGATACTGCGCTTGATTTCATACCAGAAAGCTAAGAGGTT
AAGAGATGATGGTGGAAAATTACCCAGAGGATGTATAAACCTCACCGTGCTTCCAGTCCT
GGATTTAGCCCAAAGGCAGAAAAGATGGCTGCCCAGCTCCACTATGGATAAGGTGGCAGA
ACACTTCGAAGCACCTTAAATGAGAGTACTAGGAGCAGGAACTTTTTTATACACTGTGGA
AATAAAAGCCAAATGGAACATAATGGCATTCAGATCTGCTTCACTGCATCATGAATACTA
CCAGATTCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RNLHKTAVQNGAGGALFVHRDTPENNPDTPFDFTPEN-YKRIEAIVKNYPE-GHKAAAILPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVAT-FY
R.L...A.QNGA...LFVHR..PEN.PDT..DF.PE......E..V.NYPE.G......LPVLDLAQRQ..WLP.S.M.KVAE....P.MRV....T.FY
Retrocopy
RELA*KAMQNGARRSLFVHRNNPENKPDTALDFIPES/LRG*EMMVENYPE/GCINLTVLPVLDLAQRQKRWLPSSTMDKVAEHFEAP*MRVLGAGT\FY


Parental protein
TMYNRKPVG-KYHIQVCTTTPCMLRNS
T....KP.G....IQ.C.T....L..S
Retrocopy
TLWK*KPNG\HNGIQICFTAS*ILPDS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide