RetrogeneDB ID:
retro_mputfur_1630
Organism:
Location:
GL897435.1:20180-20701 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
64.41 %
Coverage:
52.25 %
Frameshifts:
3
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1630
AAGGTTATCCATGACAATTTTGACATTGTGGAGGGACTCATGATCATAGTTCATGCCATC
ACTGCCACCCAGAGGACTGTGGACAGACCCTCTGGGAAGCTGTGGCAAGAGCCAAAGAGG
CTGCCCAGTATACGATTTCTGCTTCTAAAGTGCCACCAAGGCTGTAAGGCAAGGTCATTC
CTCAGCCAAATGGTATGTCCACTGGCATGGCTTCCATATTCCTACCTTCCACTGTGTCAA
TTTTGGATCTGTCCTGCTTCCTGAAGAAAGTTGCCAAATAGAATGACATCAAGAAGGTAG
TAAAACAAGCATCTGACAGCTTCCTCGAGGACATCCTGGGCAATGCTGAGGATCAGGTTG
TCTCCTGTGACTTTAACAATGACACCTACTCTTCTACCTTTGATTTTGGGACTGGCATTG
CTCTCAGTGACCACATTGTCAAGCTCCTTTCCTAGTATGACAGTACATTTGGCTACAGCA
ACTGGGTGGTAGATATTATGATCCTCTTGGCCTTCAGGGAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRD-GRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMA-FRVPT-PNVSVVDLTCRLEKAAKYDDI
KVIHDNF.IVEGLM..VHAITATQ.TVD.PSGKLW......AAQ..I.AS.......GKVIP..NG..TGMA.F..PT...VS..DL.C.L.K.AK..DI
Retrocopy
KVIHDNFDIVEGLMIIVHAITATQRTVDRPSGKLWQE/AKEAAQYTISASKVPPRL*GKVIPQPNGMSTGMA/FHIPT\STVSILDLSCFLKKVAK*NDI


Parental protein
KKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE
KKVVKQAS...L..ILG..EDQVVSCDFN.DT.SSTFD.G.GIAL.DH.VKL.S.YD..FGYSN.VVD.M...A..E
Retrocopy
KKVVKQASDSFLEDILGNAEDQVVSCDFNNDTYSSTFDFGTGIALSDHIVKLLS*YDSTFGYSNWVVDIMILLAFRE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide