RetrogeneDB ID:
retro_mputfur_1639
Organism:
Location:
GL897546.1:49071-49428 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
87.39 %
Coverage:
55.87 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
Atp5o
Parental gene aliases:
No gene alias available
Parental gene description:
ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit [Source:MGI Symbol;Acc:MGI:106341]

Genomic region (view in browser)





>retro_mputfur_1639
ATGGCTGTCCCAGCAGAGTCTGGCTTGTGCCAGCAGGTGCGATGCTTTAGTACAACTGTG
GTCAGGCCATTTCCCAAGCTCATGTGGCCACCTGTTCAGGTATATGATATTGAAGGTCAC
TATGCCACTGCTCTTTATTCTGCTGCATCTAAACCAGGTAAACTGGAACAAGTAGAGAAA
GAATTGTTGAGAGTAGCACAAATCTTGAAGGAACCCAAAATGGCTGCTTCCATTATGAAT
CCCTATATAAAGGGTTCCGTGAAAATGAAAAGCCTAAATGACATGAGCACAAAAGAGAGG
TTCTCTCCTCTCATATCCAACCTGATCAATGTGCTTGCTGAGAATGGTCGCCTGGAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAVPAVSGLSRQVRCFSTTVVRPFSKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKMAASIMNPYIKRSVKVKSLNDMSAKER
MAVPA.SGL..QVRCFSTTVVRPF.KL..PPVQVY.IEG.YATALYSAASK..KLEQVEKELLRVAQILKEPKMAASIMNPYIK.SVK.KSLNDMS.KER
Retrocopy
MAVPAESGLCQQVRCFSTTVVRPFPKLMWPPVQVYDIEGHYATALYSAASKPGKLEQVEKELLRVAQILKEPKMAASIMNPYIKGSVKMKSLNDMSTKER


Parental protein
FSPLTSNLINLLAENGRLD
FSPL.SNLIN.LAENGRLD
Retrocopy
FSPLISNLINVLAENGRLD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide