RetrogeneDB ID:
retro_mputfur_165
Organism:
Location:
GL896962.1:9036132-9036570 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
52.99 %
Coverage:
67.68 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_165
ATGAAGCTGTTAGGTCTCAGCATCCTGCGCAAAGAGAAGCCCAACGCAGTGCTGCTCAAC
ATGTCCTCCTTCGGCTTCTTCCAGAGGTTCAATGTTCAGGAGACTATGTGTGCCCTCTAT
GTGTGGCACGCCAGTCTTGCAGAAATGGTTGTAATGAACAGTGACTATTCATTCCATGCG
GCTGTGGCCTTGCCAGAGAAGGTACTAGATGAATTCTCCAAGCAGGTCGACAAGACAGAG
TGGCCAGTTGGATCCCTTGCTACCGTCCTAGATGGTTACCTCAGGAGATCCCAGAACCTT
GGAGAAACTGACCCCGTGTCTAAGGCATGGGCTGAGCTGGAGGCAACCAAAATCGTTCTG
CACAACACCACGGAGCCTCTGTTAGAGCAAGGGGAGAAGCTAGATGAACTGGTGTCCAAA
TCCGAAGTGTTAGAAACA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LIVERSAKGSRASVKEQEYLCHVYVRNDNLAGVVIADSEYPSRVAFTLLEKVLDEFSKHVDRIEWPVGSPASIHYTALDDYLSRYQNPREADPMTKVQAE
.....S..G.......QE..C..YV....LA..V...S.Y....A..L.EKVLDEFSK.VD..EWPVGS.A....T.LD.YL.R.QN..E.DP..K..AE
Retrocopy
VLLNMSSFGFFQRFNVQETMCALYVWHASLAEMVVMNSDYSFHAAVALPEKVLDEFSKQVDKTEWPVGSLA----TVLDGYLRRSQNLGETDPVSKAWAE


Parental protein
LDETKIILHNTMESLLERGERLDDLVSKSEVLGT
L..TKI.LHNT.E.LLE.GE.LD.LVSKSEVL.T
Retrocopy
LEATKIVLHNTTEPLLEQGEKLDELVSKSEVLET


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide