RetrogeneDB ID:
retro_mputfur_167
Organism:
Location:
GL896962.1:7476903-7477560 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
99.54 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
THAP domain containing, apoptosis associated protein 2 [Source:UniProtKB/TrEMBL;Acc:G9KT67]

Genomic region (view in browser)





>retro_mputfur_167
ATGCCGACCAATTGCGCCGCGGCGGGCTGTGCTACTACCTACAACAAGCACATTAACATC
AGCTTCCACAGGTTTCCTTTGGATCCTAAAAGAAGAAAAGAATGGATTCGCCTGCTTAGG
CGCAAAAATTTTGTGCCAGGAAAACACACTTTTCTTTGTTCAAAGCATTTTGAAGCCTCC
TGTTTTGACTTAACAGGACAAACTCGACGACTTAAAATGGATGCTGTTCCAACCATTTTT
GATTTTTGTACCCATTTAAAGTCTATGAAACTCAAGTCAAGGAATCTTTTGAAGAAAAAC
AACAGTTGTACCCCAACAGGAGCATCTAATTTAAAATCAAACATTAGTAGCCAGCAAGTA
CTACTTGAACACAGTTATGCTTTTAGGAATCCTATGGAGGCAAAAAAGAGGATAATTAAA
CTGGAAAAAGAAATAGCAAGTTTAAGAAAGAAAATGAAAACTTGCTTACAAAAAGAACGC
AGAGCAACACGAAGATGGATCAAAGCCACATGCTTGGTGAAGAATCTGGAAGCAAATAAC
ATATTACCTAAGGGCACATCAGAACACATTTTACCAACTGCCTTAAGCAGTCTTCCTTTG
GAAGATTTCAAGATTCTTGAACCTGATCAACAAGATAAAACATTACCAATTCTATAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWIRLLRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHLKSMKLKSRNLLKKN
MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWIRLLRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHLKSMKLKSRNLLKKN
Retrocopy
MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWIRLLRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHLKSMKLKSRNLLKKN


Parental protein
NSCTPTGPSNLKSNISSQQVLLEHSYAFRNPMEAKKRIIKLEKEIASLRKKMKTCLQKERRATRRWIKATCLVKNLEANNILPKGTSEHILPTALSSLPL
NSCTPTG.SNLKSNISSQQVLLEHSYAFRNPMEAKKRIIKLEKEIASLRKKMKTCLQKERRATRRWIKATCLVKNLEANNILPKGTSEHILPTALSSLPL
Retrocopy
NSCTPTGASNLKSNISSQQVLLEHSYAFRNPMEAKKRIIKLEKEIASLRKKMKTCLQKERRATRRWIKATCLVKNLEANNILPKGTSEHILPTALSSLPL


Parental protein
EDFKILEPDQQDKTLPIL
EDFKILEPDQQDKTLPIL
Retrocopy
EDFKILEPDQQDKTLPIL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide