RetrogeneDB ID:
retro_mputfur_168
Organism:
Location:
GL897030.1:5358022-5358493 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.44 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_168
ATGGCACCGAAAGCTAAGAAGGAAGCCCCTACCCCTCCCAAAGCCGAAGCCAAAGCAAAG
GCTTTGAAAGCCAAGAAAGCGGTGCTGAAAGGCGTCCACAGTCACAAAAAAAAGAAGATC
CGCACATCACCTACATTCCGACGACCCAAGACTCTGCGTCTCCGAAGGCAGCCCAAATAC
CCTCGAAAGCACGCCCCCAGGAGAAACAAGCTTGACCACTATGCCATCCTCAAGTTCCCC
CTGACTACTGAGTCCGCCATGAAGAAAATAGAAGACAACAACACACTTGTGTTCATTGTG
GATGTCAAGGCCAACAAGCACCAGATCAAACAGGCTGTGAAGAAGCTCTATGACATTGAT
GTAGCCAAGGTCAACACCTTAATCAGGCCTGATGGAGAGAAGAAGGCATACGTTCCGCTG
GCCCCTGACTATGATGCTTTGGATGTTGCCAACAAAATTGGGATCATCTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIV
MAPKAKKEAP.PPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK.APRRNKLDHYAI.KFPLTTESAMKKIEDNNTLVFIV
Retrocopy
MAPKAKKEAPTPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKHAPRRNKLDHYAILKFPLTTESAMKKIEDNNTLVFIV


Parental protein
DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII
DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYV.LAPDYDALDVANKIGII
Retrocopy
DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVPLAPDYDALDVANKIGII


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide