RetrogeneDB ID:
retro_mputfur_171
Organism:
Location:
GL896998.1:6685767-6686862 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.9 %
Coverage:
81.8 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_171
ATGGCCAGGGGTCTGGCCGGCATAGGGGGCATGCAGGGCGAGAAGGAGACCATGCAAGAC
CTGAATGACCGCCTGGCCTCCTACCTGGAGAGGGTGAGGAGCCTGGAGGCAGATAATCAG
AGACTGGAGGTGAGAATCCGGGAACACCTGGAGAAGAAGGGACCCCAGGTCAGAGACTGG
GGGCATTACTTCAAGACCATCGAGGAGCTGAGGTCTCAGATTTTTGCAAGTTCTGTGGAC
AATGCCCGCATCGTTCTGCAGATTGACAATGCCCGTCTTGCTGCTGATGACTTCAGAGTC
AAGTATGAGACGGAACTGGCCATGCGCCAGTCTGTGAAGAGTGACATCCACGGGCTCCGC
AAGGTCATCGATGACACCAATGTCACTAGGCTGCAGCTGGAGACAGAGATTGAGGCTCTC
AAGGAGGAGTTGCTCTTTATGAAGAAGAACCATGAGGAGGAAGTAAAGGGTCTACAGAAC
CAAATTGCCAACTCTGGGTTGACCGTGGAGTTGGATGCCCCCAAGTCTCAGGACCTCAGC
AAGATCATGGCAGACATCCGGGCCCAGTATGATGAGCTGGCTCGGAAGAACCGAGAGGAG
CTGGACAAATACTGGTCCCAGCAGATTGAGGAAAGCACCACAGTGATCACCACACAGACC
TCAGAGATAGGAGAGGCTGAGATGACCCTCACGGAGCTGAGACGTACTGCCCAGTCCTTG
GAGATCAACCTGGATTCGATGAGAAACCTGAAGGCCAGCTTAGAGAACAGCCTCAGGGAG
GTCGAAACCCGCTGCGCCATGCAGATGGAGCAGCTCAATGGGGTCCTGCTGCACCTGGAG
TCTGAACTGTCCCAGACCCGGGCAGAGGGGCAGCGCCAGGCCCAGGAGTATGAAGCCCTG
TTGAATGTCAAGGTCAAGCTGGAGGCTGAGATTGCTACCTATCGTCGCCTGCTGGAAGAT
GGGGAGGACTTCAATCTCAGTGACGCCCTGGACAGCAGCAGCTCCATGCAAACCATCCAG
AAAACCTCTACCCGCAAGATTGTGGATGGCAAGGTCATGTCTGAGACCAATGACACCAAA
GTTCTGAGGCGTTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MARGLAGIGGMQGEKETMQDLNDRLASYLERVRSLEADNQRLEVRIREHLEKKGPQVRDWGHYFKTIEELRSQIFASSVDNARIVLQIDNARLAADDFRV
MARGLAGIGGMQGEKETMQDLNDRLASYLERVRSLEADNQRLEVRIREHLEKKGPQVRDWGHYFKTIEELRSQIFASSVDNARIVLQIDNARLAADDFRV
Retrocopy
MARGLAGIGGMQGEKETMQDLNDRLASYLERVRSLEADNQRLEVRIREHLEKKGPQVRDWGHYFKTIEELRSQIFASSVDNARIVLQIDNARLAADDFRV


Parental protein
KYETELAMRQSVESDIHGLRKVIDDTNVTRLQLETEIEALKEELLFMKKNHEEEVKGLQNQIANSGLTVELDAPKSQDLSKIMADIRAQYDELARKNREE
KYETELAMRQSV.SDIHGLRKVIDDTNVTRLQLETEIEALKEELLFMKKNHEEEVKGLQNQIANSGLTVELDAPKSQDLSKIMADIRAQYDELARKNREE
Retrocopy
KYETELAMRQSVKSDIHGLRKVIDDTNVTRLQLETEIEALKEELLFMKKNHEEEVKGLQNQIANSGLTVELDAPKSQDLSKIMADIRAQYDELARKNREE


Parental protein
LDKYWSQQIEESTTVITTQTSEIGEAEMTLTELRRTAQSLEINLDSMRNLKASLENSLREVETRYAMQMEQLNGVLLHLESELSQTRAEGQRQAQEYEAL
LDKYWSQQIEESTTVITTQTSEIGEAEMTLTELRRTAQSLEINLDSMRNLKASLENSLREVETR.AMQMEQLNGVLLHLESELSQTRAEGQRQAQEYEAL
Retrocopy
LDKYWSQQIEESTTVITTQTSEIGEAEMTLTELRRTAQSLEINLDSMRNLKASLENSLREVETRCAMQMEQLNGVLLHLESELSQTRAEGQRQAQEYEAL


Parental protein
LNVKVKLEAEIATYRRLLEDGEDFNLSDALDSSSSMQTIQKTTTRKIVDGKVVSETNDTKVLRR
LNVKVKLEAEIATYRRLLEDGEDFNLSDALDSSSSMQTIQKT.TRKIVDGKV.SETNDTKVLRR
Retrocopy
LNVKVKLEAEIATYRRLLEDGEDFNLSDALDSSSSMQTIQKTSTRKIVDGKVMSETNDTKVLRR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide