RetrogeneDB ID:
retro_mputfur_174
Organism:
Location:
GL897036.1:3104189-3104741 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
94.54 %
Coverage:
92.89 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_174
ATGGCTCCCAGTCTTCCGGAAGGTGCTCGGCTTGGGGAAAGCAAACCCTCGCTCTGCTCC
TTTTCCATTGAGAGCATTTTAGGACTGTACCAGAAGAAAGACTGTGTTCCCTCAATGAAA
CCCCACAGGCCCTGGGCCGACACCTGCGGCTCCTCAGGGAAAGATGTTAACCTACGTGTG
CATATCCCAAGCCTTCCCAATGGGATATCCTTCCCTTGTACTGTGGATCACCCAGTGCCA
GAAGAAAGATTTTTGAAATACAAAAATTACTTTTCAACCTCAGAAAGACTTTCATTGAAA
AGAGAGCTGAGTTGGTATCGAGGCCGGAGACCCAGAACTGCTTTTACTCAAAACCAGATT
GAAGTGTTAGAAAATGTCTTTAGAGTTAACTGCTATCCTGGCATTGACATCAGAGAAGAC
TTAGCTCGAAAATTGAATCTAGAGGAAGACAGAATCCAGATCTGGTTCCAAAATCGGCAT
GCAAAGCTAAAAAGGTCCCATAGAGAATCACAGTTTCTAATGGGGAAAAAATTTTCAACA
CGAATCTCCTGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPSLPEGARLGESKPSPCSFSIESILGLDQKKDCVPSMKPHRPWADTCGSSGKDVNLRVHIPSLPNGISFPCTVDHPVPEERFLKYENYFSASERLSLK
MAPSLPEGARLGESKPS.CSFSIESILGL.QKKDCVPSMKPHRPWADTCGSSGKDVNLRVHIPSLPNGISFPCTVDHPVPEERFLKY.NYFS.SERLSLK
Retrocopy
MAPSLPEGARLGESKPSLCSFSIESILGLYQKKDCVPSMKPHRPWADTCGSSGKDVNLRVHIPSLPNGISFPCTVDHPVPEERFLKYKNYFSTSERLSLK


Parental protein
RELSWYRGRRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLARKLNLEEDRIQIWFQNRRAKLKRSHRESQFLMAKKNFNTNL
RELSWYRGRRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLARKLNLEEDRIQIWFQNR.AKLKRSHRESQFLM.KK.F.T..
Retrocopy
RELSWYRGRRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLARKLNLEEDRIQIWFQNRHAKLKRSHRESQFLMGKK-FSTRI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide