RetrogeneDB ID:
retro_mputfur_175
Organism:
Location:
GL896985.1:4136299-4137088 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
93.51 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_175
ATGGCGGCGGTCGGTATGGTGGCTGCTCGCCTCCTCCTGCTATTGCTGATGGCAGCAGCA
GTCCCCAGCCGGGCCTGGGGCAGTGGCTGCCGATCCGGAGCCGCTCTGCAGGGGGCCAGA
GCAGAAGGTCGAGAGGGTGAGGGCCGTGGCACGGTGGGGCTGCTGCTGGAGCACTCATTC
GAGATCGATGATAGTACCCACTTTCGGAAGCAGGGCTCACTGCTCTGGAACCAGCAGGAT
GGCACTTTGTCCCTGTCACAGCGGCAGCTCAATGAGGAGGAGCGGGGCCGGCTCCTGGAT
GTGGCGGCCCTGAACGGCTTATACCGGGTCCGGGTCCCTCAGCGCTCTGGGGCCCCTGAT
GGCTCAGAAGCTGGCAGCTATGTCTCCTCTTTCGTCCCTGCGTGCTCCCTGGTGGAGTTG
CATCTCTCGGACCAGCTGACGCTGCACGTGGACGTGGCTGGCAATGTGGTGGGCGTGTCA
GTGGTGACGCACCCCGGAGGCTGCTGGGGTCATGAAGTGGAAGATGTAGACCTGGAACTG
TTCAACACGTCTGTGCAGCTGCAGCCACCGGCCACCACCCCAGGTCCCGAGACCGCGGCC
TTCACTGAGCGCCTGGAGATGGAGCAGGCCCAGAAGGCCAAGAACCCGCAGGAACAGAAG
TCCTTCTTTGCCAAATATTGGATGTACATCATTACCGTCGTCCTGTTCCTCATGATGTCA
GGAGCACCAGATGCCGGGGGCCAGGGAGGGGGCGGCGGCGGGGGTGGTGGCGGGGGCAGT
GGCCGCTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAAVGVVAAHLLLLLLMAAAVPSRARGSGCRTGAALRGAGAEGREGEGCGTVGLLLEHSFEIDDSAHFRKRGSLLWNQQDGTLSLSQRQLNEEERGRLRD
MAAVG.VAA.LLLLLLMAAAVPSRA.GSGCR.GAAL.GA.AEGREGEG.GTVGLLLEHSFEIDDS.HFRK.GSLLWNQQDGTLSLSQRQLNEEERGRL.D
Retrocopy
MAAVGMVAARLLLLLLMAAAVPSRAWGSGCRSGAALQGARAEGREGEGRGTVGLLLEHSFEIDDSTHFRKQGSLLWNQQDGTLSLSQRQLNEEERGRLLD


Parental protein
VAALNGLYRVRVPQRPGAPDGSEAGSYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLELFNTSVQLQPPATAPGPETAA
VAALNGLYRVRVPQR.GAPDGSEAGSYVSSFVPACSLVE.HLSDQLTLHVDVAGNVVGVSVVTHPGGC.GHEVEDVDLELFNTSVQLQPPAT.PGPETAA
Retrocopy
VAALNGLYRVRVPQRSGAPDGSEAGSYVSSFVPACSLVELHLSDQLTLHVDVAGNVVGVSVVTHPGGCWGHEVEDVDLELFNTSVQLQPPATTPGPETAA


Parental protein
FIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDTGGQGGGGGGGGGGGSGR
F.ERLEMEQAQKAKNPQEQKSFFAKYWMYII.VVLFLMMSGAPD.GGQGGGGGGGGGGGSGR
Retrocopy
FTERLEMEQAQKAKNPQEQKSFFAKYWMYIITVVLFLMMSGAPDAGGQGGGGGGGGGGGSGR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide