RetrogeneDB ID:
retro_mputfur_177
Organism:
Location:
GL897090.1:1660928-1662029 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.62 %
Coverage:
60.12 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_177
GTTTCTCCCTCAGGGCTCATTCATTCCGCGCCAGGCCTGCCAGACACCTGCGATCTCCTT
CAGCCGCTCACGGTCGCCGCCGGCATGTCAGGCCCCGCCGCCGAGACCCCGTCCGCCATC
CAGATCTGCCGGATCATGCGGCCAGATGATGCCAATGTGGCTGGCAACGTCCACGGTGGG
ATGATCCTGAAGATGATCGAGGAGGCAGGAGCCATCATCAGCACCCGGCACTGCAACAGC
CAGAACGGGGAGCGCTGTGTGGCCGCCCTGGCCCGTGTCGAGCGCACCGACTTCCTGTCC
CCCATGTGCATTGGCGAGGTGGTGCACGTCAGCGCGGAGATCACCTACACCTCCAAGCAC
TCCGTGGAGGTCCAGGTCCACGTGATGTCAGAAAACATCCTCACAGGTACTAAAAAGCTG
ACCAATAAGGCTACCCTGTGGTATGTGCCCCTGTCACTGAAGAACGTGGACAAGGTCCTG
GAGGTGCCTCCAGTCGTGTACTCCCGGCAGGAGCAGGAGGAGGAGGGCCGGAAGCGGTAT
GAGGCCCAGAAGCTGGCGCACATGGAGACCAAGTGGAGGAACGGGGACATCGTCCAGCCT
GTCCTGAACCCAGAGCCCAACACGGTCAGCTACAGCCAGTCCAGCCTGATTCACCTGGTG
GGGCCTTCCGACTGCACCCTGCATGGCTTCGTGCACGGAGGTGTCACCATGAAGCTCATG
GACGAGGTGGCCGGAATCGTGGCTGCGCGTCATTGCAAGACCAACGTAGTCACTGCCTCC
GTGGACGCCATCAACTTCCACGACAAGATCAGAAAAGGCTGCGTCATCACCATCTCTGGC
CGCATGACCTTCACAAGCAACAAGTCCATGGAGATCGAGGTCCTGGTGGACGCCGACCCC
GTGGTGGACAACTCGCAGAAGCGCTACCGGGCGGCCAGTGCCTTCTTCACCTACGTGTCC
CTGAGCCAGGAGGGCAAGTCGCTGCCCGTGCCCCAGCTCGTGCCCGAGACCGAGGACGAG
AAGAAGCGCTTTGAGGAAGGCAAAGGGCGGTACCTGCAGATGAAGGCAAAATGGCAGGGT
CAACCAGAGCCCCAGCCCTAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVHVMSENILTGGTKKLTN
RIMRPDDANVAGNVHGG.ILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEV.HVSAEITYTSKHSVEVQVHVMSENILTG.TKKLTN
Retrocopy
RIMRPDDANVAGNVHGGMILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVVHVSAEITYTSKHSVEVQVHVMSENILTG-TKKLTN


Parental protein
KATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLARMETKWRNGDIVQPVLNPVPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLM
KATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLA.METKWRNGDIVQPVLNP..EPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLM
Retrocopy
KATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLAHMETKWRNGDIVQPVLNP--EPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLM


Parental protein
DEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDNSQKRYRAASAFFTYVSLSQEGKSLPVPQLV
DEVAGIVAARHCKTN.VTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDNSQKRYRAASAFFTYVSLSQEGKSLPVPQLV
Retrocopy
DEVAGIVAARHCKTNVVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDNSQKRYRAASAFFTYVSLSQEGKSLPVPQLV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide