RetrogeneDB ID:
retro_mputfur_178
Organism:
Location:
GL897111.1:1882208-1883525 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
99.52 %
Coverage:
95.83 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_178
ATGGGGAAATCTTTCGCCAATTTCATGTGCAAGAAGGACTTTCATCCCGCCTCCAAGTCC
AATATCAAAAAAGTATGGATGGCAGAACAGAAAATATCATATGATAAGAAGAAACAAGAA
GAATTAATGCAACAATATCTTAAAGAACAAGAATCATATGATAATAGGTTGCTTATGGGA
GATGAACGTGTAAAGAATGGCCTTAATTTCATGTATGAGGCCCCACCAGGAGCTAAAAAA
GAAAACAAAGAGAAAGAAGAAACAGAAGGAGAGACTGAATACAAATTTGAATGGCAGAAA
GGAGCCCCCCGGGAAAAATATGCCAAAGATGACATGAACATCAGAGATCAGCCCTTTGGT
ATTCAGGTTCGAAATGTGAGGTGCATTAAATGTCACAAATGGGGTCATGTCAACACAGAT
CGAGAATGTCCTCTGTTTGGTCTTTCTGGAATCAATGCAAGTTCAGTTCCCACTGATGGC
TCAGGGCCATCGATGCACCCCTCGGAGCTAATAGCGGAGATGAGAAACAGTGGGTTTGCA
CTGAAACGAAATGTACTGGGGAGAAACTTGACCGCAAATGATCCATCACAGGAATATGTT
GCAAGTGAAGGTGAAGAAGATCCAGAAGTCGAATTTTTAAAGTCACTGACAACCAAACAA
AAGCAGAAACTTCTCAGGAAATTGGACCGGCTTGAGAAGAAAAAAAAGAAAAAGAAAAAA
GATAGAAAAAAGAAAAAGCTTCAGAAGAGCAGAAGTAAACACAAAAAACATAAAAATAGG
TCCCCCTCCTCCTCTTCGTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCAGTGAGACTTCA
GAAAGCAGCAGTGAGAGTGACAACAAAGAAAAGAAAATACAAAAGAAGAAAAGAAAGAAA
AATAAGTGTTCAGGGAATAACAACAGTGATTGTGAAGAGAAGGACAAGTCTAAGAAGAGA
AAACTTCATGAAGAACTTTCTAGCAGTCACCATAACAAAGAAAAGGCCAAGGAAAAGCCT
AGGTTTTTAAAACAAGAAAGTTCTAGGGAGCATAGCAAATGGAGCCATTCTGATTCTGAC
AAAAAGTCCAGAAGCCATAACCGGAGCCCAGAGAGGAGAGGATCTGAAAGAAATGAGAGG
AGCAGCAGGAGCCAGAGCAGGGATGAGAGGGGTAGGAGAAGCAGAAGCAGAAGTCACGGT
AGTTACAAGCAAAGAGAAATAAGAAAACGGTCACAGCGAAGTCCCAGTGAAGAGCGGAAT
GGAAGAAGGGACACCAGGAGCCATGGCACAGATGTATACAGAGGAGAAAGAGCGCAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQK
MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQK
Retrocopy
MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQK


Parental protein
GAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYV
GAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYV
Retrocopy
GAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYV


Parental protein
ASEGEEDPEVEFLKSLTTKQKQKLLSNRKLDRLEKKKKKKKKDRKKKKLQKSRSKHKKHKNRSPSSSSSSSSPSSSSSSETSESSSESDNKEKKIQKKKR
ASEGEEDPEVEFLKSLTTKQKQKLL..RKLDRLEKKKKKKKKDRKKKKLQKSRSKHKKHKNRSPSSSSSSSSPSSSSSSETSESSSESDNKEKKIQKKKR
Retrocopy
ASEGEEDPEVEFLKSLTTKQKQKLL--RKLDRLEKKKKKKKKDRKKKKLQKSRSKHKKHKNRSPSSSSSSSSPSSSSSSETSESSSESDNKEKKIQKKKR


Parental protein
KKNKCSGNNNSDCEEKDKSKKRKLHEELSSSHHNKEKAKEKPRFLKQESSREHSKWSHSDSDKKSRSHNRSPERRGSERNERSSRSQSRDERGRRSRSRS
KKNKCSGNNNSDCEEKDKSKKRKLHEELSSSHHNKEKAKEKPRFLKQESSREHSKWSHSDSDKKSRSHNRSPERRGSERNERSSRSQSRDERGRRSRSRS
Retrocopy
KKNKCSGNNNSDCEEKDKSKKRKLHEELSSSHHNKEKAKEKPRFLKQESSREHSKWSHSDSDKKSRSHNRSPERRGSERNERSSRSQSRDERGRRSRSRS


Parental protein
HGSYKQREIRKRSQ
HGSYKQREIRKRSQ
Retrocopy
HGSYKQREIRKRSQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide