RetrogeneDB ID:
retro_mputfur_179
Organism:
Location:
GL896970.1:4859187-4859658 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
86.54 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_179
ATGGCGCCAAAAGCTGAGAAGGAAGCCCCTGCCCCTCCCAAAGCCGAAGCCAAAGCAAAG
GCTTTGAAAGCCAAGAAAGCGGTGCTGAAAGGCATCCCCAGTCACAAAAAAAAAAGAAGA
TCCGCACATCACCTACATTCCGACGACCCAAGACTGCGTCTCCGAAGGCAACCCAAATAC
CCTCAAAAGAGCGGCCCCAGGAGAAACAAACTTGACCACTATGCCATCATCAAGCTCCCC
CTGACTACTGAATCAGCCATGAAGAAAATAGAAGACAACAACACACTTGTGTTCATTGTG
GATGTCAAGGCCAACAAGCACCAGATCAAACAGGATGTGAAGAAGCTCTATGACATTGAT
GTAGCCAAGGTCAACACCTTAATCAGGCCTGATGGAGAGAAGAAGGCATACGTTTGGCTG
GCCCCTGACTATGATGCTTTGGATGTTGCCAACAAAATTGGGATCATCTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIV
MAPKA.KEAPAPPKAEAKAKALKAKKAVLKG..SHKKK.............LRLRRQPKYP.KS.PRRNKLDHYAIIK.PLTTESAMKKIEDNNTLVFIV
Retrocopy
MAPKAEKEAPAPPKAEAKAKALKAKKAVLKGIPSHKKKRRSAHHLHSDDPRLRLRRQPKYPQKSGPRRNKLDHYAIIKLPLTTESAMKKIEDNNTLVFIV


Parental protein
DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII
DVKANKHQIKQ.VKKLYDIDVAKVNTLIRPDGEKKAYV.LAPDYDALDVANKIGII
Retrocopy
DVKANKHQIKQDVKKLYDIDVAKVNTLIRPDGEKKAYVWLAPDYDALDVANKIGII


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide