RetrogeneDB ID:
retro_mputfur_180
Organism:
Location:
GL897181.1:200867-201734 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
79.84 %
Coverage:
69.23 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
MORF4L1
Parental gene aliases:
No gene alias available
Parental gene description:
mortality factor 4 like 1 [Source:HGNC Symbol;Acc:16989]

Genomic region (view in browser)





>retro_mputfur_180
ATGAGTTCCAGAAAGCAGGGTTCTCAAACTCGTGGACAACAATCTGCAGAAGAAGACAAC
TTTAAAAAACCAACTAGAAGCAATATGCAGAGAAGTAAGATGAGAGGGGCCTCCTCAGGA
AAGAAGACTGCTGGTCCACAGCAGAAGAATCTGGAACCGGCTCTCCCAGGGCGATGGGGG
GGTCGCTCTGCAGAGAACCCCCCTTCAGGATCTGTGAGGAAGACAAGAAAGAACAAGCAG
AAGACTCCTGGAAATGGAGATGGTGGCAGTACCAGCGAAGCACCCCAGCCACCTCGGAAG
AAGAGGGCCCGGGCCGATCCCACTGTTGAAAGCGAGGAGGCCTTTAAGAATAGAATGGAA
GTTAAAGTGAAGATTCCTGAAGAATTAAAACCATGGCTTGTTGAGGACTGGGACTTAGTT
ACCAGGCAGAAGCAGCTCTTTCAACTCCCTGCTAAGAAAAATGTAGATGCCATTCTGGAA
GAGTATGCAAATTGCAAAAAGTCGCAGGGAAATGTTGATAACAAGGAATACGCAGTTAAT
GAAGTTGTGGCAGGAATAAAAGAATATTTCAATGTGATGTTGGGCACTCAGCTGCTCTAC
AAATTCGAGAGGCCCCAGTATGCAGAAATCCTCTTGGCTCACCCTGATGCACCAATGTCC
CAGGTTTATGGAGCCCCACACCTACTGAGATTATTTGTAAGAATCGGAGCAATGTTGGCA
TATACGCCCCTTGATGAGAAGAGCCTTGCATTATTGTTGGGCTATTTGCATGATTTCCTA
AAATATCTGGCAAAGAATGCTGCATCTCTGTTTACTGCCAGTGATTACAAAGTGGCTTCG
GCTGAGTACCACCGCAAAGCCCTGTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKAPGNGDGGSTSETPPPPRKKRARVDPTVESEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQ
Q....E....G...G..........V..KT.KNKQK.PGNGDGGSTSE.P.PPRKKRAR.DPTVESEE.F.NR.EVKVKIPEELKPWLV.DWDL.TRQKQ
Retrocopy
QQKNLEPALPGRWGGRSAENPPSGSVR-KTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRMEVKVKIPEELKPWLVEDWDLVTRQKQ


Parental protein
LFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLD
LF.LPAKKNVD.ILE.YAN.KKS.GN.DNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEIL..HPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLD
Retrocopy
LFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLD


Parental protein
EKSLALLLNYLHDFLKYLAKNSAALFSASDYEVAPPEYHRKAV
EKSLALLL.YLHDFLKYLAKN.A.LF.ASDY.VA..EYHRKA.
Retrocopy
EKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide