RetrogeneDB ID:
retro_mputfur_183
Organism:
Location:
GL896907.1:20363639-20364596 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
95.6 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
PRPS1
Parental gene aliases:
No gene alias available
Parental gene description:
phosphoribosyl pyrophosphate synthetase 1 [Source:HGNC Symbol;Acc:9462]

Genomic region (view in browser)





>retro_mputfur_183
ATGCCAAATATCAAAATCTTCGGTGGCAGCTCCCACCAGGACTTATCCCAGAAAATTGCC
GACCGCCTGGGCCTGGAGCTAGGCAAGGTGGTGACGAAGAAATTCAGTAACCAGGAGACG
TGTGTGGAAATTGGCGAGAGCGTGAGGGGAGAGGATGTCTACATCGTGCAGAGTGGTTGT
GGCGAAATCAACGACAGCCTCATGGAGCTTTTGATCATGATTAATGCCTGCAAGATCGCT
TCAGCCAGCCGGGTTACCGCCGTCATCCCATGCTTCCCTTATGCCCGGCAGGATAAGAAG
GATAAGAGCCGGGCCCCCATATCCGCCAAGCTTGTGGCGAATATGCTGTCTATAGCAGGT
GCAGACCATATCATCACCATGGATTTACATGCTTCTCAGATTCAGGGCTTTTTTGATATC
CCCGTAGACAATCTGTATGCGGAGCCAGCTGTCCTGAGGTGGATAAGGGAGAACATCTCT
GAGTGGAGGAACTGCATTGTTGTCTCACCGGACGCGGGTGGAGCTAAGCGAGTGACCTCC
ATCGCAGACTGGTTGAACGTGGACTTCGCCTTGATTCACAAAGAACGGAAGAAGGCCAAC
GAAGTGGACCGCATGGTGCTAGTGGGAGACGTGAGGGATCGTGTGGCTATCCTGGTGGAT
GACATGGCTGATACCTGTGGCACCATCTGTCACGCAGCTGACAAACTCCTCTCAGCGGGA
GCCACCAAAGTTTATGCGATCTTGACTCATGGAATCTTTTCCGGGCCGGCCATTGCTCGC
ATCAACAGTGCATGCTTTGAAGCAGTGGTAGTCACCAATACCATACCTCAGGAGGATAAG
ATGAAGCAGTGCCCCAGAATACAGGTGATCGACATCTCCATGATCCTTGCAGAAGCCATC
AGGAGAACTCACAATGGGGAATCTGTTTCCTACCTGTTCAGCCATGTCCCTTTATAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKK
MPNIKIF.GSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEIND.LMELLIMINACKIASASRVTAVIPCFPYARQDKK
Retrocopy
MPNIKIFGGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDSLMELLIMINACKIASASRVTAVIPCFPYARQDKK


Parental protein
DKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKAN
DKSRAPISAKLVANMLS.AGADHIITMDLHASQIQGFFDIPVDNLYAEPAVL.WIRENISEWRNC..VSPDAGGAKRVTSIAD.LNVDFALIHKERKKAN
Retrocopy
DKSRAPISAKLVANMLSIAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLRWIRENISEWRNCIVVSPDAGGAKRVTSIADWLNVDFALIHKERKKAN


Parental protein
EVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
EVDRMVLVGDV.DRVAILVDDMADTCGTICHAADKLLSAGAT.VYAILTHGIFSGPAI.RIN.ACFEAVVVTNTIPQEDKMK.C..IQVIDISMILAEAI
Retrocopy
EVDRMVLVGDVRDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAIARINSACFEAVVVTNTIPQEDKMKQCPRIQVIDISMILAEAI


Parental protein
RRTHNGESVSYLFSHVPL
RRTHNGESVSYLFSHVPL
Retrocopy
RRTHNGESVSYLFSHVPL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide