RetrogeneDB ID:
retro_mputfur_189
Organism:
Location:
GL897001.1:6233267-6233807 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
95.58 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
UBE2C
Parental gene aliases:
No gene alias available
Parental gene description:
ubiquitin-conjugating enzyme E2C [Source:HGNC Symbol;Acc:15937]

Genomic region (view in browser)





>retro_mputfur_189
ATGGCCTCCCAGAACCGCGACCCAGCTGCCGCCAGCGTCGCCGCCGCCCGCAAAGGAGCC
GAGCCCAGTGGGGGCACCGCCTGTGGACCCGTGGGCAAGAGGCTACAGCAGGAGCTGATG
ACCCTCATGATGTCCGGTGACAAAGGAATTTCTGCCTTCCCTGAATCAGACAACCTTTTC
AAATGGGTGGGGACCATCCACGGAGCAGCTGGCACAGTGTATGAAGACCTGCGGTATAAG
CTCTCCTTGGAGTTCCCCAGTGGCTACTCCTACAATGCGCCCACAGTGAAATTCCTCACA
CCCTGCTACCACTCCAACGTGGACACCCAGGGGAACACCTGCCTGGACATCCTGAAGGAC
AAGTGGTCAGCCCTATATGACGTCAGGACCATCCTGATGTCCATCCAGAGCCTGCTAGGA
GAACCAAACATTGATAGTCCTTTGAACACACACGCTGCCGAGCTCTGGAAAAACCCCACA
GCCTTTAAGAAGTATCTACAAGAAACCTACTCAAAGCAGGTCTCCAGCCAAGATCCCTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MASQNRDPAAASVAAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLT
MASQNRDPAAASVAAARKGAEPSGG.A.GPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGY.YNAPTVKFLT
Retrocopy
MASQNRDPAAASVAAARKGAEPSGGTACGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYSYNAPTVKFLT


Parental protein
PCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGATEPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQVSSQDP
PCYH.NVDTQGN.CLDILKDKWSALYDVRTIL.SIQSLLG..EPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQVSSQDP
Retrocopy
PCYHSNVDTQGNTCLDILKDKWSALYDVRTILMSIQSLLG--EPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQVSSQDP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide