RetrogeneDB ID:
retro_mputfur_19
Organism:
Location:
GL896995.1:4959655-4960516 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.61 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
E2F-associated phosphoprotein-like protein [Source:UniProtKB/TrEMBL;Acc:G9L0G6]

Genomic region (view in browser)





>retro_mputfur_19
ATGAACCGGCTCCAGGAGGACTACGACCCCTACGCGGTAGAAGAGCCTAGCGACGAAGAA
CCCGCTTTGAGCAGTTCTGAAGATGAAGTGGATGTGCTTTTACATGGAACTCCTGACCAA
AAACGAAAACTCATCAGAGAATGTCTTACTGGAGAAAGTGAATCATCTAGTGAAGATGAA
TTTGAAAAAGAAATGGAAGCCGAATTAAATTCTACCATAAAAACAATGGAGGACAAGTTA
TCCTCTCTGGAAACAGGGTCTTCCTCGGGAGCTGGAAAAGTTGGAACAGCTCTGACAAAG
TACTATGATGATATATATTTTGATTCTGATTCTGAGGATGAAGACAAACCAGCACAGGTG
ACCAAGAAGAAGAAGAAAAAGCGACACAGGATTCCAACAAATGATGAGTTACTATATGAT
CCTGAAAAAGATAACAGAGATCAGGCCTGGGTTGATGCACAGAGAAGAGGCTACCATGGT
TTTGGAATACAGAGGCCACATCAACAACAGCAGCCTGTTCCAAATAGTGATGCTGTCTTG
AATTGCCCTGCCTGCATGACCACACTATGTCTTGATTGCCAAAGGCACGAATCCTACAAA
ACTCAGTATAGAGCAATGTTTGTGATGAATTGTTCTGTCAACAAAGAGGAGGTTCTAAGA
TACAAAATCCCAGAGAACAGGAAGAAAAGGCGAGGCCCTAAGAAGATGAGGTCCAGCCAT
GAGGATGCTGCAGAGCCAGCAGAGGCACAAGCAGAAGAACTCTACCACCCAGTCATGTGC
ACCGAATGTTCCACTGAAGTTGCAGTCTATGACAAGGATGAAGTCTTTCATTTTTTCAAT
GTTTTAGCAAGTCATTCTTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MNRLQEDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELNSTIKTMEDKLSSLETGSSSGAGKVGTALTK
MNRLQEDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELNSTIKTMEDKLSSLETGSSSGAGKVGTALTK
Retrocopy
MNRLQEDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELNSTIKTMEDKLSSLETGSSSGAGKVGTALTK


Parental protein
YYDDIYFDSDSEDEDKP-EVTKKKKKKRHRIPTNDELLYDPEKDNRDQAWVDAQRRRDYHGFGIQRPHQQQQPVPNSDAVLNCPACMTTLCLDCQRHESY
YYDDIYFDSDSEDEDKP..VTKKKKKKRHRIPTNDELLYDPEKDNRDQAWVDAQ.RR.YHGFGIQRPHQQQQPVPNSDAVLNCPACMTTLCLDCQRHESY
Retrocopy
YYDDIYFDSDSEDEDKPAQVTKKKKKKRHRIPTNDELLYDPEKDNRDQAWVDAQ-RRGYHGFGIQRPHQQQQPVPNSDAVLNCPACMTTLCLDCQRHESY


Parental protein
KTQYRAMFVMNCSVNKEEVLRYKIPENRKKRRGPKKMRSSHEDAAEPAEAQAEELYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS
KTQYRAMFVMNCSVNKEEVLRYKIPENRKKRRGPKKMRSSHEDAAEPAEAQAEELYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS
Retrocopy
KTQYRAMFVMNCSVNKEEVLRYKIPENRKKRRGPKKMRSSHEDAAEPAEAQAEELYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide