RetrogeneDB ID:
retro_mputfur_205
Organism:
Location:
GL896898.1:38210799-38211204 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
72.99 %
Coverage:
51.33 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_205
AAGTGTAAGTTGTGCAATGCGAGAAGGATCAACGTGGGGATAAAAGGAATCCCTCGTCTG
GTGACTCATGTTTCTCGTGCCATCTGCTGTCCTGATGCCCTCATCCAGGTGAATGACACC
ATTCAGATTGATTTGGAGACTGGAAAGATTACTGATTTCATCAAGGTTGATACTGGTAAT
CTGTGTATGATTAGCAGATATGTTAACTTGGGAAGAATCGGTGTGATCACCAGCAGAGAG
AGACACCTGGTTCTTTTGATGTAATTCACATGAAAGACGCCAATGGTGACAGCTTTGCCA
CCCAACTCTTCAACATTTTTGTTACTGACAAAGGCAAGAAAACCATGGATTTCTCTTCCT
GGTGGAAAGGGTATCCATCTCACTGTTACTGAAGAGAGAGACGAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERH-PGSFDVVHVKDANGNSF
K.KLC..R.I.VG.KGIP.LVTH..R.I..PD.LI.VNDTIQIDLETGKITDFIK.DTGNLCM.....NLGRIGVIT.RERH.PGSFDV.H.KDANG.SF
Retrocopy
KCKLCNARRINVGIKGIPRLVTHVSRAICCPDALIQVNDTIQIDLETGKITDFIKVDTGNLCMISRYVNLGRIGVITSRERH/PGSFDVIHMKDANGDSF


Parental protein
APRLSNIFVIGKG-NKPWISLPRGKGIRLTIAEERDK
A..L.NIFV..KG..KPWISLP.GKGI.LT..EERD.
Retrocopy
ATQLFNIFVTDKG\RKPWISLPGGKGIHLTVTEERDE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide