RetrogeneDB ID:
retro_mputfur_21
Organism:
Location:
GL896959.1:4394833-4395283 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
80.54 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
CALM2
Parental gene aliases:
No gene alias available
Parental gene description:
calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445]

Genomic region (view in browser)





>retro_mputfur_21
ATGGCCGACCAGCTGAGCGAGGAACAGGTGGCCGAGTTCAAGGAGGCCTTCTGCCTGTTT
GACAAGGACGGGGACGGCGTCATCACCACCCAGGAGCTGGGCACCGTCATGCGCTCCCTG
GGCCAGAACCCCACGGAGGCCGAGCTGCGCGACATGGTCAGCGAGATCGACCGCGACGGC
AACGGCACCGTGGACTTCCCCGAGTTCCTGGGCATGATGGCCAGGCAGCTGAAGGGCAGG
GACAGCGAGGACCAGATCCGCGAGGCCTTCCGCGTCTTCGACAAGGACGGCAACGGGCTG
GTGAGTGCCACGGAGCTGCGGCACGTGATGACCAGGCTGGGGGAGAAGCTGAGCGACGAG
GAGGTGGACGAGATGATCCGGGCTGCGGACGTGGACGGGGATGGGCAGGTGAACTACGAG
GAGTTCGTCCACATGCTGGTCTCCAAGTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
MADQL.EEQ.AEFKEAF.LFDKDGDG.ITT.ELGTVMRSLGQNPTEAEL.DM..E.D.DGNGT.DFPEFL.MMAR..K..DSE..IREAFRVFDKDGNG.
Retrocopy
MADQLSEEQVAEFKEAFCLFDKDGDGVITTQELGTVMRSLGQNPTEAELRDMVSEIDRDGNGTVDFPEFLGMMARQLKGRDSEDQIREAFRVFDKDGNGL


Parental protein
ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
.SA.ELRHVMT.LGEKL.DEEVDEMIR.AD.DGDGQVNYEEFV.M...K
Retrocopy
VSATELRHVMTRLGEKLSDEEVDEMIRAADVDGDGQVNYEEFVHMLVSK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide