RetrogeneDB ID:
retro_mputfur_219
Organism:
Location:
GL896898.1:37933424-37933730 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
62.26 %
Coverage:
82.26 %
Frameshifts:
3
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_219
AGTGGCCAAGTCAGGTCAAGATCCAAATCCAAACAAAGAAAAGATGACCGAGGGTCTAAC
CAGCATGTGGGTGCACAACCACCCAGGGAGAGCGACCGAAACAAGAGGAGGCACCACCTG
AGAGTCAGGATGTTCTACTCATCAATGGAAGGCAACTGAAAGAGCATCTGTGGCTCAAGG
ACCAGGCCAGAAGCGGATCTCTAGGACCTGCCTCAGGCAAAGGCTGGGGGTGTAACTGAA
GATGACCCTGACGTCAAGGGGAGAAATCTGCCCTTTTCAGAGCCCATTAAAATGCCAGAA
GCAGGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SGRARSRSKPK-RKDDPGSTQRVGTQKPRV-EKPKQKEAPPESRDMKPEPGKEV-EAPPAAQGPDLK-ADLQKLPQAEAGRVTGYHPGVKGRNLPFLEPI
SG..RSRSK.K.RKDD.GS.Q.VG.Q.PR..E.PKQ.EAPPES.D.....G....E....AQGP..K.ADL..LPQA.AG.VT...P.VKGRNLPF.EPI
Retrocopy
SGQVRSRSKSKQRKDDRGSNQHVGAQPPRE/ERPKQEEAPPESQDVLLINGRQL/ERASVAQGPGQK/ADL*DLPQAKAGGVTEDDPDVKGRNLPFSEPI


Parental protein
KMPRAG
KMP.AG
Retrocopy
KMPEAG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide