RetrogeneDB ID:
retro_mputfur_221
Organism:
Location:
GL896898.1:43262952-43263474 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
65.57 %
Coverage:
62.76 %
Frameshifts:
0
Stop codons:
4


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_221
AAGAAGTCAGAACCGACTGCCCAAATCCCAAATTTGGGGGTGAGAACATTTGTCAACCAT
CTACAAGGGTCTGCACTGCTCGGGGAGGAGGTGTCACGTTATCTGACAAGAGTTGAAGTG
GCAGAATTTGAAGATACTAAATCAGGTTACAGAATAGAATAGTATTTTAATGAAAATCCT
TACTTTGAAAATAAAGTTCTCTTAAAACAATTTCACACGAATGAGAGTAGTGCTCCACTG
TCGAAGTCCACTGAAATCAAATGGAAATCTGGAAAGGATTTGGTGAAATGTTGAAGTCAA
ACGTAGACTAAAGCCAGCAGGAAGGGACAGCCTGAGGAACCAGAGGCCTAGCTTCTTCAG
CTGGCTACGGACCATTCTGACGCAGATGAGTTAGGAGACGTCCTCAGAGATGGTGTTTCG
CCAAATCCACGCCAGGACTACTTGGTTCCTGATACAGATGATGAAGAAAGGAAAGAAGAT
GATGATGTCGACGAAGAAGGTATGGAAGATACTGATGAAAAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKR
K.SE..A.IPN..V.TFVNH.Q.SALLG...EE...YLTRVEV.EFED.KSGYRI..YF.ENPYFENKVL.K.FH.NES..P.SKSTEIKWKSGKDL.K.
Retrocopy
KKSEPTAQIPNLGVRTFVNHLQGSALLG---EEVSRYLTRVEVAEFEDTKSGYRIE*YFNENPYFENKVLLKQFHTNESSAPLSKSTEIKWKSGKDLVKC


Parental protein
SSQTQNKASRKRQHEEPES-FFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEEDDDDDEEEEGLEDIDEE
.SQT..KASRK.Q.EEPE.......TDHSD..ADELG.V..D...PNP.Q.YLVPD.DDEE.......DDD..EEG.ED.DE.
Retrocopy
*SQT*TKASRKGQPEEPEA*LLQLATDHSD--ADELGDVLRDGVSPNPRQDYLVPDTDDEE----RKEDDDVDEEGMEDTDEK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide