RetrogeneDB ID:
retro_mputfur_226
Organism:
Location:
GL896898.1:51393954-51394278 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.96 %
Coverage:
98.25 %
Frameshifts:
3
Stop codons:
0


Parental gene:
Parental gene symbol:
Tmem14c
Parental gene aliases:
No gene alias available
Parental gene description:
transmembrane protein 14C [Source:MGI Symbol;Acc:MGI:1913404]

Genomic region (view in browser)





>retro_mputfur_226
AAGGTCTCTGGCCCTGTAGTGTCTTTCAATTGCCAGGGTTTGGCTATGTAACACTGGCAG
CTTCTGGGGATTCACTGGCTATGCAAAAACAGGTAGTATCCCATCCCTGGCTGCTGGCCT
TTTTTTGGGTTGGTTAGCAGGCCTGGGTGCTTATCAGCTATCTCAGAATCCTTGGTTTTC
CCAGCTACCTCTGTTACCTTAGCTGGCGTTATGGGAATGAGTTTCTATCACTCTGGAAAA
TATATGCTTGCTGGCTTAGTTGGGGCTGCCAGTTTGCTGATGGTTGCCAAACTTGGGATT
AGTGTGTTGAATGGATCTCATCAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KDSGPLVPLHWIG-FGYAALVASG-GIIGYAKAGSVPSLAAGLLFGSLAGLGAYQLSQDPRNIW-VFLATSGTLAGIMGMRFYHSGKFMPAGLIAGASLL
K.SGP.V.....G.FGY..L.ASG.G..GYAK.GS.PSLAAGL..G.LAGLGAYQLSQ...N.W.VF.ATS.TLAG.MGM.FYHSGK.M.AGL...ASLL
Retrocopy
KVSGPVVSFNCQG/FGYVTLAASG/GFTGYAKTGSIPSLAAGLFLGWLAGLGAYQLSQ---NPW/VFPATSVTLAGVMGMSFYHSGKYMLAGLVGAASLL


Parental protein
MVAKLGVSFLSRPHQ
MVAKLG.S.L...HQ
Retrocopy
MVAKLGISVLNGSHQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide