RetrogeneDB ID:
retro_mputfur_227
Organism:
Location:
GL896899.1:2066617-2066914 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
53.54 %
Coverage:
78.4 %
Frameshifts:
0
Stop codons:
2


Parental gene:
Parental gene symbol:
Trmt112
Parental gene aliases:
No gene alias available
Parental gene description:
tRNA methyltransferase 11-2 [Source:MGI Symbol;Acc:MGI:1914924]

Genomic region (view in browser)





>retro_mputfur_227
GAGTGTGACTCTGTGGCTCCTCACCCCCAACCCCATGCACCTTGAGTTCTATCACATGTG
ATACCATAGGTGGCATCTGGAAGGCTTCTGGAGGTGGCCGCTACCTTGCTTCTTCTGGTT
CAAGTGCCCACAGGGCAGATTGAGGGATTTGAGCATGATGAGGAATTTCTAAGGAAGACG
CACCACTCACTGCTAGAGATAGATGTGTCAGAGGGCACCTTGCAATGCCTAGATTCTGGT
CAGCTGTTCCTGAATGGTGGCAGGATCCCCAACATGCTGTTGAGTAAGGAAAGCACC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QATEVRINPVEFNPDFVARMIPKVEWAALLEAADTLHL-VEVPKGPIEGYEHDEKFLRQMHHVLLEVDVLEGTLQCPESGRLFPISRGIPNMLLSDEET
....V...P....P......IP.V....LLE.A.TL.L.V.VP.G.IEG.EHDE.FLR..HH.LLE.DV.EGTLQC..SG.LF.....IPNMLLS.E.T
Retrocopy
ECDSVAPHPQPHAP*VLSHVIP*VASGRLLEVAATLLLLVQVPTGQIEGFEHDEEFLRKTHHSLLEIDVSEGTLQCLDSGQLFLNGGRIPNMLLSKEST


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide