RetrogeneDB ID:
retro_mputfur_23
Organism:
Location:
GL896935.1:9698285-9698966 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
79.02 %
Coverage:
99.12 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_23
ATGGCCTTGAGTGATGTTGATGTGCAGAAGCAGATTAAGCACATGATGGCTTTCATTGAG
CAGGAAGCCAATGAGAAGGCAGAAGAAATAGATGCCAAGTCTGAGGAAGAGTTCAACATC
GAGAAAGGACGCCTTGTGCAAACCCAACGACTGAAGATTATGGAGTATTACGAGAAGAAG
GAGAAGCAGATAGAACAGCAGAAGAAGATCCAGATGTCCACCATGAGGAATCAGGCCAGG
CTGAAAGTCCTGAGAGCCCGAGATGACCTCATCTCGGAGTTGCTGAATGATGCAAAGCTG
AGACTCAGCAGGATTGTGGCAGATCCAGAAATCTACCAGGGGCTGCTGGATAAGCTAGTG
CTTCAGGGTCTGCTCCGGCTGCTTGAGCCTGTGGTAATTGTCCGCTGCAGGCCACAGGAC
ATCCTCCTGGTGGAGGCTGCGGTGCAAAAAGCCATCCCCGAGTATATGATCATCTCCCAA
AAATGTGTGGAAGTCCAAATTGATCAAGAGGTGCACCTGGCTATGAATACAGCTGGAGGT
GTGGAGGTCTACAGTGGCAATCAGAGAATAAAGGTTTCCAATACCCTAGAAAGTCGACTG
GATCTCTTGGCCCAACAAAAGATGCCTGAAATACGAGAGGCCTTGTTTGGAGCCAATGCC
AACAGAAAGTTTTTCATATAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQ
MALSD.DVQKQIKHMMAFIEQEANEKAEEIDAK.EEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKIQMS...NQARLKVLRARDDLI..LLN.AK.
Retrocopy
MALSDVDVQKQIKHMMAFIEQEANEKAEEIDAKSEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKIQMSTMRNQARLKVLRARDDLISELLNDAKL


Parental protein
RLSKVVKDTTRYQVLLDGLVLQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKKDVDVQIDQEAYLPEEIAGGVEIYNGDRKIKVSNTLESRL
RLS..V.D...YQ.LLD.LVLQGL..LLEP..IVRCR.QD..LV.AAVQKAIP.Y.I...K.V.VQIDQE..L....AGGVE.Y.G...IKVSNTLESRL
Retrocopy
RLSRIVADPEIYQGLLDKLVLQGLLRLLEPVVIVRCRPQDILLVEAAVQKAIPEYMIISQKCVEVQIDQEVHLAMNTAGGVEVYSGNQRIKVSNTLESRL


Parental protein
DLIAQQMMPEVRGALFGANANRKF
DL.AQQ.MPE.R.ALFGANANRKF
Retrocopy
DLLAQQKMPEIREALFGANANRKF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide